RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 AVPR1AP37288 418 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 RABGGTBP53611 331 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 MTTPP55157 894 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 BST2Q10589 180 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TTLL4Q14679 1199 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PDK1Q15118 436 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 DBN1Q16643 649 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CCDC153Q494R4 210 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ANKRD20A4Q4UJ75 823 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TMEM198Q66K66 360 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.182e-7■■■■□ 19.4
SMARCC1-202ENST00000425518 CNBD2Q96M20 576 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 NAT9Q9BTE0 207 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ILKAPQ9H0C8 392 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM49AQ9H0Q0 323 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TASP1Q9H6P5 420 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 COPS7BQ9H9Q2 264 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 NMRAL1Q9HBL8 299 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TXNRD2Q9NNW7 524 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 IARS2Q9NSE4 1012 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ZDHHC7Q9NXF8 308 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 VANGL2Q9ULK5 521 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SF3B1O75533 1304 aaKnown RBP eCLIP7.69□□□□□ -1.184e-6■■■■■ 99.6
SMARCC1-202ENST00000425518 C15orf38-AP3S2A0A0A6YYH1 394 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 HACD1B0YJ81 288 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 H3BNX3 289 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 M0QYT0 321 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 IRF6O14896 467 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PHGDHO43175 533 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TRPA1O75762 1119 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 AKAP5P24588 427 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PMLP29590 882 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC26A2P50443 739 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SERPINB8P50452 374 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ADIGQ0VDE8 80 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 FLOT2Q14254 428 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TLR1Q15399 786 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ARPINQ7Z6K5 226 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 KBTBD6Q86V97 674 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ZDHHC17Q8IUH5 632 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PQLC1Q8N2U9 271 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ANKRD52Q8NB46 1076 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 URGCPQ8TCY9 931 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 NAT14Q8WUY8 206 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CATSPER2Q96P56 530 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 RTKNQ9BST9 563 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SNX25Q9H3E2 840 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 LRRC40Q9H9A6 602 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ELP3Q9H9T3 547 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 APPL1Q9UKG1 709 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 TLK1Q9UKI8 766 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CSADQ9Y600 493 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 COL11A1P12107 1806 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 MYOCOSA0A1B0GUC4 107 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 KPNA7A9QM74 516 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 STX16-NPEPL1H3BU86 382 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 EEF2KO00418 725 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ZBTB7AO95365 584 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 LGALS2P05162 132 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 THRAP10827 490 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 NDUFV1P49821 464 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 NAGLUP54802 743 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SH3D19Q5HYK7 790 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF484Q5JVG2 852 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SPANXN3Q5MJ09 141 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SPATA24Q86W54 205 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 DSELQ8IZU8 1212 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 SPATA6LQ8N4H0 392 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CCNYL1Q8N7R7 359 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 KYQ8NBH2 561 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 AFG1LQ8WV93 481 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CENPIQ92674 756 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 RCN3Q96D15 328 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 DCUN1D1Q96GG9 259 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 RBBP8Q99708 897 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 EPAS1Q99814 870 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 CHRAC1Q9NRG0 131 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 FZD10Q9ULW2 581 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PCDHGB4Q9UN71 923 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 FIS1Q9Y3D6 152 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 PCDHGB5Q9Y5G0 923 aa7.69□□□□□ -1.18
SMARCC1-202ENST00000425518 G3V2L1 256 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TK2O00142 265 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 CLDN5O00501 218 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PIGNO95427 931 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 XRCC1P18887 633 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 THOP1P52888 689 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 BCAT1P54687 386 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 MPP3Q13368 585 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ART3Q13508 389 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM187BQ17R55 369 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC5A9Q2M3M2 681 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 LSM12Q3MHD2 195 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TMC7Q7Z402 723 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PIGZQ86VD9 579 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM156AQ8NDB6 213 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 BEST2Q8NFU1 509 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RNF217Q8TC41 542 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TMA16Q96EY4 203 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TSNARE1Q96NA8 513 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms