RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SLC45A4Q5BKX6 768 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 HEATR6Q6AI08 1181 aaKnown RBP10.6□□□□□ -0.71
MDC1-205ENST00000425072 TIGD7Q6NT04 549 aaPredicted RBP10.6□□□□□ -0.71
MDC1-205ENST00000425072 RFWD3Q6PCD5 774 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 NPNTQ6UXI9 565 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 OTOP3Q7RTS5 596 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 PCGF5Q86SE9 256 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ADGRG2Q8IZP9 1017 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ALLCQ8N6M5 410 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 EIF1ADQ8N9N8 165 aaKnown RBP10.6□□□□□ -0.71
MDC1-205ENST00000425072 TTC16Q8NEE8 873 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 BPIFB1Q8TDL5 484 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 HTR3CQ8WXA8 447 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ING5Q8WYH8 240 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ATG4AQ8WYN0 398 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.6□□□□□ -0.71
MDC1-205ENST00000425072 IRF7Q92985 503 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 MSLNLQ96KJ4 702 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ASB16Q96NS5 453 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 SLC39A8Q9C0K1 460 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 FAM114A2Q9NRY5 505 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 HAUS2Q9NVX0 235 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 CD207Q9UJ71 328 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 TBC1D30Q9Y2I9 924 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 C5orf60A6NFR6 353 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 TTI1O43156 1089 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 TSPAN3O60637 253 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 RAMP2O60895 175 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 TBL1XO60907 577 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 GCATO75600 419 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 CNTN5O94779 1100 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 PECAM1P16284 738 aaPredicted RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 LTBRP36941 435 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 GGCXP38435 758 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 ADCY8P40145 1251 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 GARSP41250 739 aaKnown RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 RENBPP51606 427 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 GUCY2DQ02846 1103 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 CAV1Q03135 178 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 PPIDQ08752 370 aaKnown RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 AP1B1Q10567 949 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 ZNF77Q15935 545 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 ANO4Q32M45 955 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 ALFQ53S48 1182 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 FAM78AQ5JUQ0 283 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 TTC27Q6P3X3 843 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 GET4Q7L5D6 327 aaPredicted RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 JAMLQ86YT9 394 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 BBS7Q8IWZ6 715 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 FATE1Q969F0 183 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 WBP2Q969T9 261 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 HDAC11Q96DB2 347 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 FAM161BQ96MY7 647 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 OLFM3Q96PB7 478 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 TMEM121Q9BTD3 319 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 SLC2A11Q9BYW1 496 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 FAM129AQ9BZQ8 928 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 USP29Q9HBJ7 922 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 EPB41L5Q9HCM4 733 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 KIAA1522Q9P206 1035 aaPredicted RBP10.59□□□□□ -0.71
MDC1-205ENST00000425072 PAK5Q9P286 719 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 CCL26Q9Y258 94 aa10.59□□□□□ -0.71
MDC1-205ENST00000425072 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 RASA4BC9J798 803 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 SMAPO00193 183 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 DFFAO00273 331 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 GFRA2O00451 464 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 TRDMT1O14717 391 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 MATN3O15232 486 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 KCNN4O15554 427 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 RASA4O43374 803 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 HEXIM1O94992 359 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 IFNB1P01574 187 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 LAMP2P13473 410 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 RBL1P28749 1068 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 IFNAR2P48551 515 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 RPS24P62847 133 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 SLC7A5Q01650 507 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 GNA12Q03113 381 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 DLX2Q07687 328 aaPredicted RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 IL10RBQ08334 325 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 CALCOCO2Q13137 446 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 CUL1Q13616 776 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 PTK6Q13882 451 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 HNRNPDQ14103 355 aaKnown RBP10.58□□□□□ -0.72
MDC1-205ENST00000425072 PDGFRLQ15198 375 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 P3H1Q32P28 736 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
MDC1-205ENST00000425072 WDR93Q6P2C0 686 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms