RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ECT2LQ008S8 904 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 PTK2Q05397 1052 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 SYCP1Q15431 976 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 C5orf22Q49AR2 442 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 ZNF776Q68DI1 518 aaPredicted RBP16.69■□□□□ 0.26
DDR1-234ENST00000424544 IL27RAQ6UWB1 636 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 OLFML1Q6UWY5 402 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
DDR1-234ENST00000424544 BAHD1Q8TBE0 780 aaPredicted RBP16.69■□□□□ 0.26
DDR1-234ENST00000424544 PTPRN2Q92932 1015 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 MRFAP1L1Q96HT8 127 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
DDR1-234ENST00000424544 MIR1-1HGQ9H1L0 117 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 PABPC3Q9H361 631 aaKnown RBP16.69■□□□□ 0.26
DDR1-234ENST00000424544 ADAMTS1Q9UHI8 967 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 PCDHGB2Q9Y5G2 931 aa16.69■□□□□ 0.26
DDR1-234ENST00000424544 TYW5A2RUC4 315 aaKnown RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 HYAL3O43820 417 aaPredicted RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 HSF2BPO75031 334 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 DNTTP04053 509 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 CD27P26842 260 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 CDH5P33151 784 aaPredicted RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 PBX1P40424 430 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 USP8P40818 1118 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 AFF3P51826 1226 aaKnown RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 ST8SIA6P61647 398 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 CDK17Q00537 523 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 CDH18Q13634 790 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 ZNF423Q2M1K9 1284 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 KIF19Q2TAC6 998 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 FBXL22Q6P050 247 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 NAXDQ8IW45 347 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 ATP6V0D2Q8N8Y2 350 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 ZNF397Q8NF99 534 aaPredicted RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 NT5C3BQ969T7 300 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 FAM131CQ96AQ9 280 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
DDR1-234ENST00000424544 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 EBF2Q9HAK2 575 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 SERGEFQ9UGK8 458 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 PCOLCE2Q9UKZ9 415 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 OR51B4Q9Y5P0 310 aa16.68■□□□□ 0.26
DDR1-234ENST00000424544 A0A1B0GVT2 93 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 DKK1O94907 266 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 ERBB2P04626 1255 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 CCR1P32246 355 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 GRIA4P48058 902 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 GALCP54803 685 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 SLC6A3Q01959 620 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 TTC31Q49AM3 519 aaPredicted RBP16.67■□□□□ 0.26
DDR1-234ENST00000424544 PTPN20Q4JDL3 420 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 ARTNQ5T4W7 220 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 OTUD1Q5VV17 481 aaPredicted RBP16.67■□□□□ 0.26
DDR1-234ENST00000424544 CXorf57Q6NSI4 855 aaKnown RBP16.67■□□□□ 0.26
DDR1-234ENST00000424544 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 CHSY1Q86X52 802 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
DDR1-234ENST00000424544 FRS2Q8WU20 508 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 ADAMTS14Q8WXS8 1223 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 IGSF8Q969P0 613 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 NEUROG2Q9H2A3 272 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 TM9SF3Q9HD45 589 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 TM7SF3Q9NS93 570 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 FBXL12Q9NXK8 326 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 KLK13Q9UKR3 277 aa16.67■□□□□ 0.26
DDR1-234ENST00000424544 FNDC3AQ9Y2H6 1198 aaKnown RBP16.67■□□□□ 0.26
DDR1-234ENST00000424544 CELSR3Q9NYQ7 3312 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 EDDM13A0A1B0GTR0 161 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 A0A1B0GVM2 712 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 TCAF2A6NFQ2 919 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 F5H5T6 163 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 I6L893 689 aaPredicted RBP16.66■□□□□ 0.26
DDR1-234ENST00000424544 MOCS3O95396 460 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 CER1O95813 267 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 MZF1P28698 734 aaPredicted RBP16.66■□□□□ 0.26
DDR1-234ENST00000424544 NOS2P35228 1153 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 MATKP42679 507 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 GABRB2P47870 512 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 KLK7P49862 253 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 MTA1Q13330 715 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 AUHQ13825 339 aaKnown RBP16.66■□□□□ 0.26
DDR1-234ENST00000424544 CST6Q15828 149 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 KCNT1Q5JUK3 1230 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 SLCO6A1Q86UG4 719 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 ZDHHC17Q8IUH5 632 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 PASD1Q8IV76 773 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 MMAAQ8IVH4 418 aaKnown RBP16.66■□□□□ 0.26
DDR1-234ENST00000424544 VSTM4Q8IW00 320 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 CHCHD4Q8N4Q1 142 aa16.66■□□□□ 0.26
DDR1-234ENST00000424544 C1orf131Q8NDD1 294 aaKnown RBP16.66■□□□□ 0.26
DDR1-234ENST00000424544 NEK11Q8NG66 645 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms