RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	BRCC3	P46736	316 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	GATM	P50440	423 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ATXN1	P54253	815 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	SMARCB1	Q12824	385 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	SLC10A2	Q12908	348 aa	Predicted RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	NME3	Q13232	169 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ITIH4	Q14624	930 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FASTKD3	Q14CZ7	662 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	TMED2	Q15363	201 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	MSS51	Q4VC12	460 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	BRMS1L	Q5PSV4	323 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	BSPRY	Q5W0U4	402 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ASTL	Q6HA08	431 aa	Predicted RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FOXR1	Q6PIV2	292 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	TAX1BP1	Q86VP1	789 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ANKMY2	Q8IV38	441 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	SRRM1	Q8IYB3	904 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	CYP4X1	Q8N118	509 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ARHGAP18	Q8N392	663 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	COLGALT1	Q8NBJ5	622 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FBF1	Q8TES7	1133 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	CKAP2	Q8WWK9	683 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	CASP10	Q92851	521 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	MAGEB18	Q96M61	343 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FAM193B	Q96PV7	902 aa	Predicted RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	PRMT1	Q99873	361 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	PAAF1	Q9BRP4	392 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	APOL5	Q9BWW9	433 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	TRABD	Q9H4I3	376 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	DDIT4	Q9NX09	232 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	SAMD15	Q9P1V8	674 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ZNF180	Q9UJW8	692 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	INPP5F	Q9Y2H2	1132 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	RRP15	Q9Y3B9	282 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	FAM169A	Q9Y6X4	670 aa		10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	RIF1	Q5UIP0	2472 aa	Known RBP	10.31	□□□□□ -0.76
POLR1A-204	ENST00000424089	ERI2	A8K979	691 aa	Known RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	APRT	P07741	180 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	BDNF	P23560	247 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	IGFBP6	P24592	240 aa	Predicted RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	PRKCH	P24723	683 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	PPM1A	P35813	382 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	MTHFR	P42898	656 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	MAGEA11	P43364	429 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CORO7	P57737	925 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TPI1	P60174	286 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ERVFC1	P60507	584 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	COG7	P83436	770 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ELAVL2	Q12926	359 aa	Known RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	MTA1	Q13330	715 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	SPARCL1	Q14515	664 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ANKRD20A2	Q5SQ80	823 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ANKRD20A1	Q5TYW2	823 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ANKRD20A3	Q5VUR7	823 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	LRRC8B	Q6P9F7	803 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ZNF449	Q6P9G9	518 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	C6orf89	Q6UWU4	347 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	RGS9BP	Q6ZS82	235 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	BHLHA9	Q7RTU4	235 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TMC7	Q7Z402	723 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	PIGW	Q7Z7B1	504 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CAND1	Q86VP6	1230 aa	Known RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	SLC26A11	Q86WA9	606 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	LRRC49	Q8IUZ0	686 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	COLGALT2	Q8IYK4	626 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	PYROXD2	Q8N2H3	581 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	LZTR1	Q8N653	840 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CCDC197	Q8NCU1	140 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	VN1R2	Q8NFZ6	395 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CCDC110	Q8TBZ0	833 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	DENND1A	Q8TEH3	1009 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	NDRG1	Q92597	394 aa	Known RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	SEC16B	Q96JE7	1060 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CABS1	Q96KC9	395 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	C8orf48	Q96LL4	319 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CNTNAP3B	Q96NU0	1288 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	HAPLN3	Q96S86	360 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	PAFAH2	Q99487	392 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TCF25	Q9BQ70	676 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CNTNAP3	Q9BZ76	1288 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ZCWPW1	Q9H0M4	648 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	S1PR5	Q9H228	398 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	FBXO44	Q9H4M3	255 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	COMMD8	Q9NX08	183 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	DONSON	Q9NYP3	566 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	FNIP2	Q9P278	1114 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	IGSF9	Q9P2J2	1179 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CTNNAL1	Q9UBT7	734 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TBK1	Q9UHD2	729 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TRHDE	Q9UKU6	1024 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	CACNA1B	Q00975	2339 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	DCHS1	Q96JQ0	3298 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	FAM186A	A6NE01	2351 aa		10.3	□□□□□ -0.76
POLR1A-204	ENST00000424089	TRIP11	Q15643	1979 aa		10.29	□□□□□ -0.76
POLR1A-204	ENST00000424089	TCRBV9S1A1T	A0A576	114 aa		10.29	□□□□□ -0.76
POLR1A-204	ENST00000424089	OR6C75	A6NL08	312 aa		10.29	□□□□□ -0.76
POLR1A-204	ENST00000424089	TRIM66	O15016	1216 aa		10.29	□□□□□ -0.76

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