RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 RTN2O75298 545 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 SERPING1P05155 500 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 RHOCP08134 193 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 MYBL1P10243 752 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 BCKDHBP21953 392 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 RRM1P23921 792 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 OXTRP30559 389 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 DPP6P42658 865 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 ZNF143P52747 638 aaPredicted RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 RPL6Q02878 288 aaKnown RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 CREB5Q02930 508 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 LMNB2Q03252 620 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 SFSWAPQ12872 951 aaKnown RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 CAMK2GQ13555 558 aaPredicted RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 TRIM14Q14142 442 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 CSRP2Q16527 193 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 C5orf22Q49AR2 442 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 SPDYCQ5MJ68 293 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 CYP2U1Q7Z449 544 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 C14orf80Q86SX3 495 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 TMEM245Q9H330 911 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 CD248Q9HCU0 757 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 SEMA4GQ9NTN9 838 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 TAS2R14Q9NYV8 317 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 SLC25A13Q9UJS0 675 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 INTS6Q9UL03 887 aaKnown RBP11.26□□□□□ -0.61
USP49-204ENST00000423567 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 PTPRZ1P23471 2315 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 EDDM13A0A1B0GTR0 161 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 DRGXA6NNA5 263 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 PRR5-ARHGAP8B1AHC4 643 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 FTLP02792 175 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 DNTTP04053 509 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 MZF1P28698 734 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 CD6P30203 668 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 CASP14P31944 242 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 ADRA1BP35368 520 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 MPLP40238 635 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 PLK1P53350 603 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 KRT83P78385 493 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 ARHGAP8P85298 464 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 HNRNPA1L2Q32P51 320 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 TTC31Q49AM3 519 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 EFHC2Q5JST6 749 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 SH3PXD2AQ5TCZ1 1133 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 E4F1Q66K89 784 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 CXorf57Q6NSI4 855 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 RWDD4Q6NW29 188 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 SCYL2Q6P3W7 929 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 TFAP2DQ7Z6R9 452 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 SETD3Q86TU7 594 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 CACUL1Q86Y37 369 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 APCDD1Q8J025 514 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 ZNF366Q8N895 744 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 C12orf50Q8NA57 414 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 CENPIQ92674 756 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 NTAN1Q96AB6 310 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 ZNF653Q96CK0 615 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 FEM1AQ9BSK4 669 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 CNPY3Q9BT09 278 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 C2orf49Q9BVC5 232 aaPredicted RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 ZYG11BQ9C0D3 744 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 MKRN2Q9H000 416 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 SLC6A17Q9H1V8 727 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 PRSS16Q9NQE7 514 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 ANLNQ9NQW6 1124 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 TMPRSS4Q9NRS4 437 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 MPP6Q9NZW5 540 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 OR12D3Q9UGF7 316 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 TBC1D30Q9Y2I9 924 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 SNX10Q9Y5X0 201 aa11.25□□□□□ -0.61
USP49-204ENST00000423567 RIF1Q5UIP0 2472 aaKnown RBP11.25□□□□□ -0.61
USP49-204ENST00000423567 GPR179Q6PRD1 2367 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 IGLV3-10A0A075B6K4 115 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 IGHV1OR15-9A0A0B4J2B8 117 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 TCRBV5S1A1TA0A578 114 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 TARSL2A2RTX5 802 aaKnown RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 I6L893 689 aaPredicted RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP49-204ENST00000423567 CCP110O43303 1012 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 CNTN5O94779 1100 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 GYPCP04921 128 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 SDHBP21912 280 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 PSMA2P25787 234 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 OR1E1P30953 314 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 CTSOP43234 321 aaPredicted RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 TPMTP51580 245 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 IRAK1P51617 712 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 COPAP53621 1224 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 AIF1P55008 147 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms