RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 XYLT1Q86Y38 959 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 ZDHHC17Q8IUH5 632 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 KDM1BQ8NB78 822 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 OR52K2Q8NGK3 314 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 C1orf216Q8TAB5 229 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 EPS8L1Q8TE68 723 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 NPY6RQ99463 290 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 STK33Q9BYT3 514 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 BTBD1Q9H0C5 482 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 PABPC3Q9H361 631 aaKnown RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 ANLNQ9NQW6 1124 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 PIGVQ9NUD9 493 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 DNAAF2Q9NVR5 837 aaKnown RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 SERGEFQ9UGK8 458 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SNX10Q9Y5X0 201 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 USP24Q9UPU5 2620 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SPAARA0A1B0GVQ0 90 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 UPK3BL1B0FP48 263 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 UPK3BL2E5RIL1 263 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 EPHB6O15197 1021 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 MID1O15344 667 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 BCAT2O15382 392 aaPredicted RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 ADCY5O95622 1261 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 TOP3BO95985 862 aaKnown RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 MMEP08473 750 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 CD59P13987 128 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 VAV1P15498 845 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 GABRB2P47870 512 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 SULT1E1P49888 294 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 ARID5BQ14865 1188 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 CST6Q15828 149 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 TTC39BQ5VTQ0 682 aaPredicted RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 RNF219Q5W0B1 726 aaPredicted RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 SLC20A1Q8WUM9 679 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 TBCBQ99426 244 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 PCED1AQ9H1Q7 454 aa15.65■□□□□ 0.1
USB1-202ENST00000423271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.65■□□□□ 0.1
USB1-202ENST00000423271 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.65■□□□□ 0.1
USB1-202ENST00000423271 ASPMQ8IZT6 3477 aa15.64■□□□□ 0.1
USB1-202ENST00000423271 KMT2BQ9UMN6 2715 aaPredicted RBP15.64■□□□□ 0.09
USB1-202ENST00000423271 EDDM13A0A1B0GTR0 161 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 GOLGA6L19H0YKK7 550 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 GOLGA8SH3BPF8 625 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 GFPT2O94808 682 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SPINK2P20155 84 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 FLT3P36888 993 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 PSMD8P48556 350 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 CXCR3P49682 368 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 TPM4P67936 248 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 NOMO3P69849 1222 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 FAM193AP78312 1265 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 UBXN1Q04323 297 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SYCP1Q15431 976 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 NAA35Q5VZE5 725 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 TRNP1Q6NT89 227 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 ERICH1Q86X53 443 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 MMAAQ8IVH4 418 aaKnown RBP15.64■□□□□ 0.09
USB1-202ENST00000423271 STK40Q8N2I9 435 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 GANCQ8TET4 914 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 CPA5Q8WXQ8 436 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 PTPRN2Q92932 1015 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 NT5C3BQ969T7 300 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 BIRC7Q96CA5 298 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 C18orf8Q96DM3 657 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 ALG14Q96F25 216 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 TKTL2Q9H0I9 626 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SIK2Q9H0K1 926 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SLC32A1Q9H598 525 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 IL21RQ9HBE5 538 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SGK2Q9HBY8 427 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 TMPRSS4Q9NRS4 437 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 FAM207AQ9NSI2 230 aaPredicted RBP15.64■□□□□ 0.09
USB1-202ENST00000423271 ARHGEF38Q9NXL2 777 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 NOCTQ9UK39 431 aaKnown RBP15.64■□□□□ 0.09
USB1-202ENST00000423271 STAP1Q9ULZ2 295 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 WASF3Q9UPY6 502 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 SIK3Q9Y2K2 1263 aa15.64■□□□□ 0.09
USB1-202ENST00000423271 CABIN1Q9Y6J0 2220 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 A0A1B0GVT2 93 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 A0A1W2PP55 124 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 TARSL2A2RTX5 802 aaKnown RBP15.63■□□□□ 0.09
USB1-202ENST00000423271 TEX33O43247 280 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 CNTN5O94779 1100 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 FSBPO95073 299 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 LSM8O95777 96 aaKnown RBP15.63■□□□□ 0.09
USB1-202ENST00000423271 SCNN1AP37088 669 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 CSNK1EP49674 416 aaKnown RBP15.63■□□□□ 0.09
USB1-202ENST00000423271 PLK1P53350 603 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
USB1-202ENST00000423271 SLC12A1Q13621 1099 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 LAYNQ6UX15 382 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 USP30Q70CQ3 517 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 NAP1L5Q96NT1 182 aaPredicted RBP15.63■□□□□ 0.09
USB1-202ENST00000423271 CAMK1GQ96NX5 476 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 FAM129BQ96TA1 746 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 ORAI3Q9BRQ5 295 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 ZDHHC5Q9C0B5 715 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 FBXL12Q9NXK8 326 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms