RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 LMAN2Q12907 356 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 SEMA3BQ13214 749 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 LRRC32Q14392 662 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 PPP6R3Q5H9R7 873 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-202ENST00000422544 DGKKQ5KSL6 1271 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 TMEM215Q68D42 235 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CXorf57Q6NSI4 855 aaKnown RBP9.54□□□□□ -0.88
PDGFC-202ENST00000422544 Q6ZS52 159 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CHST9Q7L1S5 443 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 ANKS1BQ7Z6G8 1248 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 DAAM2Q86T65 1068 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 TMEM105Q8N8V8 129 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 OR52K2Q8NGK3 314 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 TEKT4Q8WW24 435 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 SORCS1Q8WY21 1168 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CLDN23Q96B33 292 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 EPAS1Q99814 870 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 KLHL11Q9NVR0 708 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 KIAA1522Q9P206 1035 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-202ENST00000422544 GGA2Q9UJY4 613 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 NEU3Q9UQ49 428 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 GRID2IPA4D2P6 1211 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 PRR23AA6NEV1 266 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 H0Y858 1186 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 EEF2KO00418 725 aaKnown RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 DAPK3O43293 454 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 RNF40O75150 1001 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 PALMO75781 387 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 RHOCP08134 193 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 KRT7P08729 469 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 CD48P09326 243 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 PABPC1P11940 636 aaKnown RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 GOT1P17174 413 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 MZF1P28698 734 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 AVPR2P30518 371 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 OR1E1P30953 314 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 TIE1P35590 1138 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 KIR2DL1P43626 348 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ARSEP51690 589 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 CDH6P55285 790 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 TPI1P60174 286 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 GAS6Q14393 721 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 KRT81Q14533 505 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 DPYSL2Q16555 572 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 FUT11Q495W5 492 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 FBXO43Q4G163 708 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 C2orf27AQ580R0 203 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ZFYVE27Q5T4F4 411 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 RNF219Q5W0B1 726 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 C11orf63Q6NUN7 778 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 RFX8Q6ZV50 586 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 KIAA0907Q7Z7F0 614 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ADIPOR2Q86V24 386 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 NLRP14Q86W24 1093 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 APCDD1Q8J025 514 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 SYNPOQ8N3V7 929 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF557Q8N988 423 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 KCTD6Q8NC69 237 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 RAPGEF5Q92565 580 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 TSGA10Q9BZW7 698 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 PCDH18Q9HCL0 1135 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ZDHHC4Q9NPG8 344 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 LZTFL1Q9NQ48 299 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 NDFIP2Q9NV92 336 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 TMEM248Q9NWD8 314 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ELOVL2Q9NXB9 296 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 CWC15Q9P013 229 aaKnown RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 INTS6Q9UL03 887 aaKnown RBP9.53□□□□□ -0.88
PDGFC-202ENST00000422544 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 TBC1D30Q9Y2I9 924 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 PPP2R2CQ9Y2T4 447 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 ASPMQ8IZT6 3477 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 COL4A2P08572 1712 aa9.53□□□□□ -0.88
PDGFC-202ENST00000422544 A0A0D9SEW6 157 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 H3BRJ5 948 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 TIMM44O43615 452 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 KRT86O43790 486 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 ERCC2P18074 760 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 AMPD1P23109 780 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 IL4RP24394 825 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 HOXC13P31276 330 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 HTR7P34969 479 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 RPS9P46781 194 aaKnown RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 HCAR3P49019 387 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 PLK1P53350 603 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 OXCT1P55809 520 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 MTAPQ13126 283 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms