RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 NSMCE4AQ9NXX6 385 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 BAIAP2L1Q9UHR4 511 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 YJEFN3A6XGL0 299 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 E7ENQ6 273 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 KDM1AO60341 852 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 BAG2O95816 211 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SNRPD1P62314 119 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 IL1RL1Q01638 556 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 DDX39BQ13838 428 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SLC25A52Q3SY17 297 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 UBXN11Q5T124 520 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PPP1R36Q96LQ0 422 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PRDM12Q9H4Q4 367 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PSMC3IPQ9P2W1 217 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 RAB23Q9ULC3 237 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SQORQ9Y6N5 450 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 LTBP1Q14766 1721 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 APOC4-APOC2K7ER74 178 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 CES2O00748 559 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 FGF10O15520 208 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 VPS26AO75436 327 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 APOC2P02655 101 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PFKMP08237 780 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ITGB6P18564 788 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ZNF135P52742 658 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PTK2BQ14289 1009 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 HIC1Q14526 733 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SGO1Q5FBB7 561 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SLC26A9Q7LBE3 791 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 LRRC57Q8N9N7 239 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 FBXO36Q8NEA4 188 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 DIS3LQ8TF46 1054 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 UTP6Q9NYH9 597 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 FAM153AQ9UHL3 310 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 NDRG2Q9UN36 371 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 CPQQ9Y646 472 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 LRPAP1P30533 357 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 CORO1AP31146 461 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PCK1P35558 622 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 SLC29A2Q14542 456 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 ANKRD20A8PQ5CZ79 823 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 SH3PXD2AQ5TCZ1 1133 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 CLEC20AQ6ZU45 233 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PRELID2Q8N945 189 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 SNX31Q8N9S9 440 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PPWD1Q96BP3 646 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 RNF157Q96PX1 679 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 FAM124BQ9H5Z6 455 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 IARS2Q9NSE4 1012 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 TBC1D14Q9P2M4 693 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 A0A1W2PRU2 124 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 SYNDIG1LA6NDD5 238 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 TRIM49D1C9J1S8 452 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 AGRPO00253 132 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PITPNM1O00562 1244 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 GSTA4O15217 222 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 BUD23O43709 281 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 MGEA5O60502 916 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 OPHN1O60890 802 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 NDUFS2O75306 463 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 DAB1O75553 588 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 GLP2RO95838 553 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 GJA1P17302 382 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PPP3CCP48454 512 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 NR2C2P49116 596 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 CDH17Q12864 832 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 CCDC142Q17RM4 750 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 TRMT11Q7Z4G4 463 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PRUNE1Q86TP1 453 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 FAM124AQ86V42 546 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 STK32AQ8WU08 396 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.94□□□□□ -0.822e-7■■■■■ 64.2
CMSS1-201ENST00000421999 SENP1Q9P0U3 644 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PAGE1O75459 146 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 TTC4O95801 387 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 COL6A1P12109 1028 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 MAXP61244 160 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 ZSCAN26Q16670 478 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 UPP1Q16831 310 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 RFWD3Q6PCD5 774 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 MARK2Q7KZI7 788 aaKnown RBP9.94□□□□□ -0.82
CMSS1-201ENST00000421999 OR6K2Q8NGY2 324 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 POF1BQ8WVV4 589 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 GPR88Q9GZN0 384 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 VCXQ9H320 206 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 ZFP14Q9HCL3 533 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 AASDHPPTQ9NRN7 309 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM51Q9NW97 253 aa9.94□□□□□ -0.82
CMSS1-201ENST00000421999 ARHGAP10A1A4S6 786 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 C1QTNF3-AMACRE9PGA6 284 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 FGF18O76093 207 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 ALDH1A2O94788 518 aa9.93□□□□□ -0.82
CMSS1-201ENST00000421999 NFATC1O95644 943 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms