RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TBC1D30Q9Y2I9 924 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 LUC7L2Q9Y383 392 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 BZW2Q9Y6E2 419 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 SPTBN4Q9H254 2564 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 CEP250Q9BV73 2442 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 CCP110O43303 1012 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 ADRA1BP35368 520 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 NUMBP49757 651 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 RPL6Q02878 288 aaKnown RBP27.16■■□□□ 1.94
CDK9-202ENST00000421939 CREB5Q02930 508 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 LMNB2Q03252 620 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 SULT2A1Q06520 285 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 HNRNPA1L2Q32P51 320 aaKnown RBP27.16■■□□□ 1.94
CDK9-202ENST00000421939 PRSS16Q9NQE7 514 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 PARVAQ9NVD7 372 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 MPP6Q9NZW5 540 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 RALGAPA1Q6GYQ0 2036 aa27.16■■□□□ 1.94
CDK9-202ENST00000421939 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 BCLAF3A2AJT9 711 aaKnown RBP27.15■■□□□ 1.94
CDK9-202ENST00000421939 ATMINO43313 823 aaPredicted RBP27.15■■□□□ 1.94
CDK9-202ENST00000421939 SRGAP2O75044 1071 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 FTLP02792 175 aaPredicted RBP27.15■■□□□ 1.94
CDK9-202ENST00000421939 RHOCP08134 193 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 DHPSP49366 369 aaPredicted RBP27.15■■□□□ 1.94
CDK9-202ENST00000421939 ARID5BQ14865 1188 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 CCDC6Q16204 474 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 SPDYCQ5MJ68 293 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 ARTNQ5T4W7 220 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 PLEKHA7Q6IQ23 1121 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 CYP2U1Q7Z449 544 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 TFAP2DQ7Z6R9 452 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 DNAAF5Q86Y56 855 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 TMEFF1Q8IYR6 380 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 NTAN1Q96AB6 310 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 ALG14Q96F25 216 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 FEM1AQ9BSK4 669 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 CNPY3Q9BT09 278 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 VPS28Q9UK41 221 aa27.15■■□□□ 1.94
CDK9-202ENST00000421939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.15■■□□□ 1.948e-9■■■■□ 21.5
CDK9-202ENST00000421939 AP5Z1O43299 807 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 RTN2O75298 545 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 SERPING1P05155 500 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 DESP17661 470 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 STK19P49842 368 aaPredicted RBP27.14■■□□□ 1.94
CDK9-202ENST00000421939 NRG1Q02297 640 aaPredicted RBP27.14■■□□□ 1.94
CDK9-202ENST00000421939 MAMLD1Q13495 774 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 PLA2G2CQ5R387 149 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 PRR23CQ6ZRP0 262 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 VPS36Q86VN1 386 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 CCDC185Q8N715 623 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 RPL10LQ96L21 214 aaKnown RBP27.14■■□□□ 1.94
CDK9-202ENST00000421939 ZYG11BQ9C0D3 744 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 MUC3BQ9H195 1237 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 MTG2Q9H4K7 406 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 OR51B4Q9Y5P0 310 aa27.14■■□□□ 1.94
CDK9-202ENST00000421939 FOXD2O60548 495 aaPredicted RBP27.13■■□□□ 1.93
CDK9-202ENST00000421939 ACADMP11310 421 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 MANEALQ5VSG8 457 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 ARMCX6Q7L4S7 300 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 SETD3Q86TU7 594 aaPredicted RBP27.13■■□□□ 1.93
CDK9-202ENST00000421939 ZNF653Q96CK0 615 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 TRIM11Q96F44 468 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 OSBPL2Q9H1P3 480 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 ITM2CQ9NQX7 267 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 VPS45Q9NRW7 570 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 PPARGC1AQ9UBK2 798 aaKnown RBP27.13■■□□□ 1.93
CDK9-202ENST00000421939 OR12D3Q9UGF7 316 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 SLCO3A1Q9UIG8 710 aa27.13■■□□□ 1.93
CDK9-202ENST00000421939 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.13■■□□□ 1.93
CDK9-202ENST00000421939 DOCK4Q8N1I0 1966 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 TTC34A8MYJ7 566 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 SIN3BO75182 1162 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 ZNF806P0C7X5 589 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 C7P10643 843 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 CD6P30203 668 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 CASP14P31944 242 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 NNMTP40261 264 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 PTGER3P43115 390 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 TPMTP51580 245 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 OGDHQ02218 1023 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 SCAPQ12770 1279 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 C6orf118Q5T5N4 469 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 SPECC1LQ69YQ0 1117 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.12■■□□□ 1.93
CDK9-202ENST00000421939 ZNF212Q9UDV6 495 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 CNOT8Q9UFF9 292 aaKnown RBP27.12■■□□□ 1.93
CDK9-202ENST00000421939 SLC25A13Q9UJS0 675 aa27.12■■□□□ 1.93
CDK9-202ENST00000421939 NUP205Q92621 2012 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 EDDM13A0A1B0GTR0 161 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 NDUFS2O75306 463 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 IGLV3-19P01714 112 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 PLEKP08567 350 aaPredicted RBP27.11■■□□□ 1.93
CDK9-202ENST00000421939 OR1E1P30953 314 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 RPS14P62263 151 aaKnown RBP27.11■■□□□ 1.93
CDK9-202ENST00000421939 TRIM14Q14142 442 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 LYSMD4Q5XG99 296 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 ZNF776Q68DI1 518 aaPredicted RBP27.11■■□□□ 1.93
CDK9-202ENST00000421939 TMC6Q7Z403 805 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 ISCUQ9H1K1 167 aa27.11■■□□□ 1.93
CDK9-202ENST00000421939 SMOC1Q9H4F8 434 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms