RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 ZP2Q05996 745 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 SSRP1Q08945 709 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 C2orf54Q08AI8 447 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 FOXC1Q12948 553 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 NNTQ13423 1086 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 ADGRE1Q14246 886 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 MAPK6Q16659 721 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 KRTCAP3Q53RY4 240 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 HSP90AA4PQ58FG1 418 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 FAM76BQ5HYJ3 339 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 MDH1BQ5I0G3 518 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 C6orf118Q5T5N4 469 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 KIAA0319Q5VV43 1072 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 CNKSR3Q6P9H4 555 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 TXNDC11Q6PKC3 985 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 MARK2Q7KZI7 788 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 RAB11FIP2Q7L804 512 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 NUP54Q7Z3B4 507 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 ZDHHC14Q8IZN3 488 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 ENDOVQ8N8Q3 282 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 DTX3Q8N9I9 347 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 PRSS33Q8NF86 280 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 SYTL5Q8TDW5 730 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 ASZ1Q8WWH4 475 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 SLC22A18Q96BI1 424 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 TOE1Q96GM8 510 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 C7orf34Q96L11 122 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 GLT1D1Q96MS3 346 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 USP28Q96RU2 1077 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 WDR24Q96S15 920 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 NUDT16L1Q9BRJ7 211 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 FSD1Q9BTV5 496 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 TMEM168Q9H0V1 697 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 PLGRKTQ9HBL7 147 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 TM9SF3Q9HD45 589 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 INTS10Q9NVR2 710 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 HSPBP1Q9NZL4 362 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 CD300AQ9UGN4 299 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 CHORDC1Q9UHD1 332 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 TINAGQ9UJW2 476 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.24□□□□□ -1.73
PTPN22-202ENST00000420377 PARP14Q460N5 1801 aa4.24□□□□□ -1.73
PTPN22-202ENST00000420377 A0A1B0GTQ1 180 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 LOC390937A0A1W2PQ73 354 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ASB14A6NK59 587 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 PCP4L1A6NKN8 68 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ATP6V1G2-DDX39BF2Z307 99 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 PSMD11O00231 422 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 AREL1O15033 823 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 PDPK1O15530 556 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 GFRA3O60609 400 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 HSF2BPO75031 334 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 TMEM127O75204 238 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ZNF865P0CJ78 1059 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 PIM1P11309 404 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 XPAP23025 273 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 CCNE1P24864 410 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ICAM3P32942 547 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 TKTL1P51854 596 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 NAA20P61599 178 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 KCNJ10P78508 379 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 OCRLQ01968 901 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 OCA2Q04671 838 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RAD51Q06609 339 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 SERINC3Q13530 473 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 HNRNPDQ14103 355 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 SPRED3Q2MJR0 410 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 SMU1Q2TAY7 513 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 GLE1Q53GS7 698 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 GPATCH4Q5T3I0 446 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 SLX4IPQ5VYV7 408 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 HAUS3Q68CZ6 603 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 IYDQ6PHW0 289 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ZYG11AQ6WRX3 759 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RBM43Q6ZSC3 357 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 DCP2Q8IU60 420 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 CAMK1DQ8IU85 385 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RHPN2Q8IUC4 686 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ZNF295-AS1Q8N0V1 137 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ANKRD13CQ8N6S4 541 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 NIPA2Q8N8Q9 360 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ST13P5Q8NFI4 369 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 DACT3Q96B18 629 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 DGCR14Q96DF8 476 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 NECTIN4Q96NY8 510 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RAD9AQ99638 391 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 OLFM1Q99784 485 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ZCCHC2Q9C0B9 1178 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RNF38Q9H0F5 515 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ABHD16BQ9H3Z7 469 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 TRIM45Q9H8W5 580 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RNPEPL1Q9HAU8 725 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RC3H2Q9HBD1 1191 aaKnown RBP4.23□□□□□ -1.73
PTPN22-202ENST00000420377 CBX8Q9HC52 389 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 KBTBD4Q9NVX7 518 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 UCKL1Q9NWZ5 548 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 ARHGAP26Q9UNA1 814 aa4.23□□□□□ -1.73
PTPN22-202ENST00000420377 RPL26L1Q9UNX3 145 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms