RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TLE2Q04725 743 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 MTM1Q13496 603 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CRYMQ14894 314 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 PDK4Q16654 411 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 FAM182AQ5T1J6 154 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SDHAF4Q5VUM1 108 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SNX30Q5VWJ9 437 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 PID1Q7Z2X4 250 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 TMEM173Q86WV6 379 aaPredicted RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CHSY1Q86X52 802 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CCDC117Q8IWD4 279 aaPredicted RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 C4orf33Q8N1A6 199 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 UMODL1-AS1Q8N2C9 162 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 ATPAF2Q8N5M1 289 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 NETO2Q8NC67 525 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CCDC197Q8NCU1 140 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 FBXO32Q969P5 355 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 APOPT1Q96IL0 206 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 VN1R3Q9BXE9 311 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 RNF208Q9H0X6 261 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 RETREG1Q9H6L5 497 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 NOL6Q9H6R4 1146 aaKnown RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CWH43Q9H720 699 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 LRRC40Q9H9A6 602 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 TMEM248Q9NWD8 314 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 DONSONQ9NYP3 566 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SEPT10Q9P0V9 454 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF212Q9UDV6 495 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 IKBKGQ9Y6K9 419 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 FAM237BA0A1B0GVD1 139 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 WDR27A2RRH5 827 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 DRGXA6NNA5 263 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TCP11X1B4DZS4 312 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TRIM49D1C9J1S8 452 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MATN3O15232 486 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 KRT37O76014 449 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 KRT38O76015 456 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 IL1BP01584 269 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MT-ND3P03897 115 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ATF6P18850 670 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 KRT4P19013 534 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 NFKB1P19838 968 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 CA4P22748 312 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MGAT1P26572 445 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 FOXN2P32314 431 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 RPA3P35244 121 aaPredicted RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ETV4P43268 484 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 NPY2RP49146 381 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 KPNA1P52294 538 aaPredicted RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 NDST2P52849 883 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 HTRA3P83110 453 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TAF10Q12962 218 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 LRRC14Q15048 493 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC1A5Q15758 541 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 USP41Q3LFD5 358 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TRIM60Q495X7 471 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 C5orf22Q49AR2 442 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MS4A13Q5J8X5 152 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 LGSNQ5TDP6 509 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TIGD7Q6NT04 549 aaPredicted RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TRMT10BQ6PF06 316 aaKnown RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 C14orf80Q86SX3 495 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TMEM135Q86UB9 458 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 CEP57Q86XR8 500 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 GPR65Q8IYL9 337 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 CNTD1Q8N815 330 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 PPM1NQ8N819 430 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ATP6V0D2Q8N8Y2 350 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ANKLE1Q8NAG6 615 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MGARPQ8TDB4 240 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ISL2Q96A47 359 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF689Q96CS4 500 aaPredicted RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 IGSF21Q96ID5 467 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 SERAC1Q96JX3 654 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 BTN2A3PQ96KV6 586 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 B3GALT6Q96L58 329 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 PGLYRP2Q96PD5 576 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 FCRL5Q96RD9 977 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 TGS1Q96RS0 853 aaKnown RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 PLCD4Q9BRC7 762 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 HERC2P3Q9BVR0 1158 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 CEP41Q9BYV8 373 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC39A8Q9C0K1 460 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ZMYND15Q9H091 742 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 VPS11Q9H270 941 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 SYBUQ9NX95 663 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 SAMD15Q9P1V8 674 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 GRID1Q9ULK0 1009 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 HBS1LQ9Y450 684 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms