RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	MRPS5	P82675	430 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	DUSP4	Q13115	394 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	IKBKE	Q14164	716 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	UGT3A1	Q6NUS8	523 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SPATA31D4	Q6ZUB0	917 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	GLT6D1	Q7Z4J2	308 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	PSTK	Q8IV42	348 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SEMA3C	Q99985	751 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	NIFK	Q9BYG3	293 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	NMRAL1	Q9HBL8	299 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	PCDH18	Q9HCL0	1135 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	TSPAN8	P19075	237 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	STARD3	Q14849	445 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SLC10A6	Q3KNW5	377 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SCUBE1	Q8IWY4	988 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	IQCK	Q8N0W5	287 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SPATA6L	Q8N4H0	392 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	ARL10	Q8N8L6	244 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	FCRL2	Q96LA5	508 aa	Predicted RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	MRPL9	Q9BYD2	267 aa	Known RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	PDZD7	Q9H5P4	517 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	IL1RAPL1	Q9NZN1	696 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	PACSIN3	Q9UKS6	424 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SNX13	Q9Y5W8	968 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	CNTNAP1	P78357	1384 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	BTNL10	A8MVZ5	291 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	PAPSS1	O43252	624 aa	Predicted RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TLR5	O60602	858 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SERPINE1	P05121	402 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TPBGL	P0DKB5	382 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	ATP4A	P20648	1035 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	HAL	P42357	657 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	DRG2	P55039	364 aa	Known RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	CTBP1	Q13363	440 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TCEA2	Q15560	299 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TSHZ1	Q6ZSZ6	1077 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	DENND1C	Q8IV53	801 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TNS4	Q8IZW8	715 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	PRCC	Q92733	491 aa	Predicted RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	CCDC126	Q96EE4	140 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	OMD	Q99983	421 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	YIPF2	Q9BWQ6	316 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	RXFP1	Q9HBX9	757 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	TXNRD2	Q9NNW7	524 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	CCDC167	Q9P0B6	97 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	AFDN	P55196	1824 aa	Known RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	MEI4	A8MW99	385 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	ARIH2	O95376	493 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	KRT16	P08779	473 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	ZCCHC18	P0CG32	403 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	FMO4	P31512	558 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	DAB2	P98082	770 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	PLOD1	Q02809	727 aa	Predicted RBP	13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SPRYD7	Q5W111	196 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SDE2	Q6IQ49	451 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	CFAP52	Q8N1V2	620 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	JADE3	Q92613	823 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	P2RY11	Q96G91	374 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	NUMA1	Q14980	2115 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212	SNED1	Q8TER0	1413 aa		13.47	□□□□□ -0.25
BDNF-208	ENST00000418212		A0A1W2PPM1	405 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	RBAK-RBAKDN	I3L0D1	243 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	DNM1L	O00429	736 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	XPO1	O14980	1071 aa	Known RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CCNT2	O60583	730 aa	Known RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CILP	O75339	1184 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	RASSF9	O75901	435 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	PIGN	O95427	931 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CKB	P12277	381 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	RFX3	P48380	749 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	KPNA1	P52294	538 aa	Predicted RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TUSC3	Q13454	348 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	PDPK2P	Q6A1A2	396 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	PLEKHA7	Q6IQ23	1121 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	UCMA	Q8WVF2	138 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	FAM162A	Q96A26	154 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	NDN	Q99608	321 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	POLR1E	Q9GZS1	481 aa	Known RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	GRIN2D	O15399	1336 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	ADGRA3	Q8IWK6	1321 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TPP1	O14773	563 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TSPAN1	O60635	241 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	PDE5A	O76074	875 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	RTN3	O95197	1032 aa	Predicted RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	PCDH8	O95206	1070 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CALB2	P22676	271 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	NPY2R	P49146	381 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	SMAD3	P84022	425 aa	Known RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CYLC2	Q14093	348 aa	Predicted RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TARBP2	Q15633	366 aa	Known RBP	13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	VPS37A	Q8NEZ2	397 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	CERS2	Q96G23	380 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TBL1Y	Q9BQ87	522 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	DUSP16	Q9BY84	665 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	SLC7A5P2	Q9GIP4	190 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	ST6GALNAC4	Q9H4F1	302 aa		13.46	□□□□□ -0.25
BDNF-208	ENST00000418212	TAS2R13	Q9NYV9	303 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms