RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NFS1Q9Y697 457 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 ACSL3O95573 720 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 APRTP07741 180 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 RHOQP17081 205 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 HDCP19113 662 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 SMAD3P84022 425 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 SLC29A2Q14542 456 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 AFMIDQ63HM1 303 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 ARNTL2Q8WYA1 636 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 WDR83Q9BRX9 315 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 PABPC3Q9H361 631 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 ASAH2Q9NR71 780 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 TMEM248Q9NWD8 314 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 RAD54BQ9Y620 910 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 CHD5Q8TDI0 1954 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 DRGXA6NNA5 263 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 F5H5T6 163 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 NCAM2O15394 837 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 RIPK2O43353 540 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 AVILO75366 819 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 OLFM2O95897 454 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 MX2P20592 715 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 PSMB4P28070 264 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 PAPOLAP51003 745 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 RPS24P62847 133 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 NTHL1P78549 312 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 SLMAPQ14BN4 828 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 KYNUQ16719 465 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 PABPC1LQ4VXU2 614 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 PCGF5Q86SE9 256 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 CCDC13Q8IYE1 715 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 ATPAF2Q8N5M1 289 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.41■□□□□ 0.38
CALD1-204ENST00000417172 MRPS31Q92665 395 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 NINJ2Q9NZG7 142 aa17.41■□□□□ 0.38
CALD1-204ENST00000417172 DNMT3BQ9UBC3 853 aaKnown RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 ZFP37Q9Y6Q3 630 aaPredicted RBP17.41■□□□□ 0.38
CALD1-204ENST00000417172 WASH4PA8MWX3 477 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 TSPAN3O60637 253 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 MAFKO60675 156 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 CKMP06732 381 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 SLC11A2P49281 568 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 HIF1AQ16665 826 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 SLC5A9Q2M3M2 681 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 HOOK3Q86VS8 718 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 ANKMY2Q8IV38 441 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 OR52K2Q8NGK3 314 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 ZSCAN18Q8TBC5 510 aaPredicted RBP17.4■□□□□ 0.38
CALD1-204ENST00000417172 HMCESQ96FZ2 354 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 GDF15Q99988 308 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 GORASP1Q9BQQ3 440 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 TMEM51Q9NW97 253 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 KLHL8Q9P2G9 620 aaPredicted RBP17.4■□□□□ 0.38
CALD1-204ENST00000417172 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
CALD1-204ENST00000417172 C2orf16Q68DN1 1984 aa17.39■□□□□ 0.38
CALD1-204ENST00000417172 RFXAPO00287 272 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 ZBTB24O43167 697 aaPredicted RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 GREM1O60565 184 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 OAS2P29728 719 aaKnown RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 GRIA1P42261 906 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 PDIA2Q13087 525 aaKnown RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 OLIG2Q13516 323 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 PPP2R2DQ66LE6 453 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 CAPN12Q6ZSI9 719 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 PID1Q7Z2X4 250 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 SHKBP1Q8TBC3 707 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 OGFRQ9NZT2 677 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 CHADO15335 359 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 JCHAINP01591 159 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 CD68P34810 354 aaPredicted RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 MAGEA4P43358 317 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 DENND2CQ68D51 928 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 AGGF1Q8N302 714 aaeCLIP17.39■□□□□ 0.377e-7■■■□□ 15.8
CALD1-204ENST00000417172 LZTR1Q8N653 840 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 RUFY1Q96T51 708 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 SLC46A2Q9BY10 475 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
CALD1-204ENST00000417172 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
CALD1-204ENST00000417172 MYOFQ9NZM1 2061 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 J3KR12 359 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 OPHN1O60890 802 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 MOSPD3O75425 235 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 STK10O94804 968 aaKnown RBP17.38■□□□□ 0.37
CALD1-204ENST00000417172 RHOP08100 348 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 OR1E1P30953 314 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 ACVRL1P37023 503 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 CEP85LQ5SZL2 805 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 LEKR1Q6ZMV7 388 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 CNTD1Q8N815 330 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 ARL8AQ96BM9 186 aa17.38■□□□□ 0.37
CALD1-204ENST00000417172 SAMD11Q96NU1 681 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms