RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR14C36Q8NHC7 312 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 MDM1Q8TC05 714 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 PTPRN2Q92932 1015 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 RNF34Q969K3 372 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 ELF4Q99607 663 aaPredicted RBP14.89□□□□□ -0.03
PAF1-202ENST00000416728 FTSJ1Q9UET6 329 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 TPX2Q9ULW0 747 aaKnown RBP14.89□□□□□ -0.03
PAF1-202ENST00000416728 GTF3C3Q9Y5Q9 886 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 CACNA1GO43497 2377 aa14.89□□□□□ -0.03
PAF1-202ENST00000416728 SYNJ2BP-COX16A0A087WUM0 186 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 A0A1B0GTQ1 180 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 BECN2A8MW95 431 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 GADD45BO75293 160 aaPredicted RBP14.88□□□□□ -0.03
PAF1-202ENST00000416728 GLI1P08151 1106 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 MZF1P28698 734 aaPredicted RBP14.88□□□□□ -0.03
PAF1-202ENST00000416728 CD38P28907 300 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 NUMBP49757 651 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 CCR5P51681 352 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 ADPRHP54922 357 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 OXCT1P55809 520 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 EIF4EBP2Q13542 120 aaPredicted RBP14.88□□□□□ -0.03
PAF1-202ENST00000416728 KCNJ12Q14500 433 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 EFHC1Q5JVL4 640 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 GBP6Q6ZN66 633 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 DEFB106AQ8N104 65 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 RPRD1AQ96P16 312 aaPredicted RBP14.88□□□□□ -0.03
PAF1-202ENST00000416728 SLC2A13Q96QE2 648 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 SPAG5Q96R06 1193 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 PPP1R9BQ96SB3 815 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 PRMT1Q99873 361 aaKnown RBP14.88□□□□□ -0.03
PAF1-202ENST00000416728 EBF2Q9HAK2 575 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 COX16Q9P0S2 106 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 APEX2Q9UBZ4 518 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 RWDD2AQ9UIY3 292 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 WDFY3Q8IZQ1 3526 aa14.88□□□□□ -0.03
PAF1-202ENST00000416728 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 HSF2BPO75031 334 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 WNT1P04628 370 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 VAV1P15498 845 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 SLC9A1P19634 815 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 PLK1P53350 603 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 MTA1Q13330 715 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 SLC45A4Q5BKX6 768 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 PRAMEF14Q5SWL7 426 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 FBXL22Q6P050 247 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 DSG4Q86SJ6 1040 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 GATAD2AQ86YP4 633 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 SHC3Q92529 594 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 SERAC1Q96JX3 654 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 PPP1R13BQ96KQ4 1090 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 NOX5Q96PH1 765 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 CPXM1Q96SM3 734 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 GDF3Q9NR23 364 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 ASNSD1Q9NWL6 643 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 GPSM3Q9Y4H4 160 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 ZFYVE26Q68DK2 2539 aa14.87□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3DA0A087WVF3 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3IA0A087WXS9 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3EA0A087X179 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3KA0A087X1G2 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3FA6NER0 549 aaPredicted RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 C10orf142B7Z368 130 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3LB9A6J9 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 GRAP2O75791 330 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 ITGAVP06756 1048 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3HP0C7X1 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 APBA1Q02410 837 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 CENPCQ03188 943 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 NME3Q13232 169 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 AUHQ13825 339 aaKnown RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 EXOC3L4Q17RC7 722 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 ACCSLQ4AC99 568 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3GQ6DHY5 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3CQ6IPX1 549 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 CXorf57Q6NSI4 855 aaKnown RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 C19orf48Q6RUI8 117 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 MARCH9Q86YJ5 346 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 TBC1D3Q8IZP1 549 aaPredicted RBP14.86□□□□□ -0.03
PAF1-202ENST00000416728 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 FRS2Q8WU20 508 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 SLC25A13Q9UJS0 675 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 PCDHGC3Q9UN70 934 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
PAF1-202ENST00000416728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 A0A1W2PR77 199 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 GTPBP10A4D1E9 387 aaKnown RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 FAM149AA5PLN7 773 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 WNT9AO14904 365 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 YKT6O15498 198 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 DRD3P35462 400 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 ARRB1P49407 418 aaPredicted RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 SNX16P57768 344 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PPP2CBP62714 309 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PPP2CAP67775 309 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PTK2Q05397 1052 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 ZNF177Q13360 481 aaPredicted RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 SMAD1Q15797 465 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms