RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 NUDCD1Q96RS6 583 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TTLL2Q9BWV7 592 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TLE6Q9H808 572 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 OLA1Q9NTK5 396 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 HAO1Q9UJM8 370 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 INSL6Q9Y581 213 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PCDHB12Q9Y5F1 795 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 NEBLO76041 1014 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 HAUS5O94927 633 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 ABLIM3O94929 683 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 TGDSO95455 350 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 IFNB1P01574 187 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 KRT4P19013 534 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 OR1D2P34982 312 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 EIF3EP60228 445 aaKnown RBP11.88□□□□□ -0.51
RFFL-205ENST00000415395 BLMHQ13867 455 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFFL-205ENST00000415395 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 ZNF276Q8N554 614 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 BADQ92934 168 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
RFFL-205ENST00000415395 HAUS1Q96CS2 278 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 SERPINB11Q96P15 392 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 CDK5RAP1Q96SZ6 601 aaKnown RBP11.88□□□□□ -0.51
RFFL-205ENST00000415395 CYTH2Q99418 400 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 SEPT5Q99719 369 aaPredicted RBP11.88□□□□□ -0.51
RFFL-205ENST00000415395 CLSTN3Q9BQT9 956 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 OSBPL2Q9H1P3 480 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 TLR8Q9NR97 1041 aaKnown RBP11.88□□□□□ -0.51
RFFL-205ENST00000415395 ARHGEF38Q9NXL2 777 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 FNIP2Q9P278 1114 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 LRRC42Q9Y546 428 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 RAD54BQ9Y620 910 aa11.88□□□□□ -0.51
RFFL-205ENST00000415395 A0A1W2PQH9 124 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 A8MUI8 341 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 E7ESA3 106 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 IL1BP01584 269 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 MT-ND3P03897 115 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 ATP5BP06576 529 aaKnown RBP11.87□□□□□ -0.51
RFFL-205ENST00000415395 RBP3P10745 1247 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 ACADSP16219 412 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 GNAZP19086 355 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 GPR15P49685 360 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
RFFL-205ENST00000415395 DUSP4Q13115 394 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 SEMA3BQ13214 749 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 MTA1Q13330 715 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 RAB33AQ14088 237 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 PPP2R5DQ14738 602 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 TMEM240Q5SV17 173 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 LGSNQ5TDP6 509 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 OTOAQ7RTW8 1153 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 CHSY1Q86X52 802 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 TTC9BQ8N6N2 239 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 PAFAH2Q99487 392 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 FAM118BQ9BPY3 351 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 DHRS4Q9BTZ2 278 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 MTIF3Q9H2K0 278 aaKnown RBP11.87□□□□□ -0.51
RFFL-205ENST00000415395 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 TRIM33Q9UPN9 1127 aa11.87□□□□□ -0.51
RFFL-205ENST00000415395 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
RFFL-205ENST00000415395 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 BCLAF3A2AJT9 711 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 FOXO6A8MYZ6 492 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 HGSO14964 777 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 DNAJC6O75061 913 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PEX11AO75192 247 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SLC2A3P11169 496 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 NEFHP12036 1026 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 CCR1P32246 355 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 DPYSQ14117 519 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SLC1A5Q15758 541 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 CCDC6Q16204 474 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 TAF1BQ53T94 588 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 ACBD5Q5T8D3 534 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 ZNF449Q6P9G9 518 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 C4orf22Q6V702 233 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 TMCO2Q7Z6W1 182 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ADAM32Q8TC27 787 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 RTP4Q96DX8 246 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 EPAS1Q99814 870 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 TMEM121Q9BTD3 319 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms