RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 EME2A4GXA9 379 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 RIOK3O14730 519 aaKnown RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 STX6O43752 255 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 LONP1P36776 959 aaKnown RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 METAP1P53582 386 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 POLE2P56282 527 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 EIF3IQ13347 325 aaKnown RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 BIRC3Q13489 604 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 SPIDRQ14159 915 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 ELAVL3Q14576 367 aaKnown RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 DSG4Q86SJ6 1040 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 UNC93AQ86WB7 457 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 MFN1Q8IWA4 741 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 FBXO39Q8N4B4 442 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 ZNF557Q8N988 423 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-208ENST00000414711 OR13H1Q8NG92 308 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 TMPRSS4Q9NRS4 437 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 DNAJC28Q9NX36 388 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 STK17AQ9UEE5 414 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 ERVW-1Q9UQF0 538 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.2
CPNE1-208ENST00000414711 FRMD3A2A2Y4 597 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 CASC3O15234 703 aaKnown RBP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 TBL1XO60907 577 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 KIF20AO95235 890 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 LATS1O95835 1130 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 SLFN14P0C7P3 912 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 PRLRP16471 622 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 POU3F2P20265 443 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 UGT1A5P35504 534 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 HNRNPKP61978 463 aaKnown RBP eCLIP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 YWHAGP61981 247 aaKnown RBP eCLIP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 DRAP1Q14919 205 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 NR0B2Q15466 257 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 KMT5BQ4FZB7 885 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 ZNF542PQ5EBM4 170 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 PERM1Q5SV97 790 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 BORAQ6PGQ7 559 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 WDR48Q8TAF3 677 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 IFT43Q96FT9 208 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 TUBD1Q9UJT1 453 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 INTS6Q9UL03 887 aaKnown RBP16.32■□□□□ 0.2
CPNE1-208ENST00000414711 LIMCH1Q9UPQ0 1083 aa16.32■□□□□ 0.2
CPNE1-208ENST00000414711 RP1P56715 2156 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 MUSKO15146 869 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 SLC31A1O15431 190 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 SRPRAP08240 638 aaKnown RBP16.31■□□□□ 0.2
CPNE1-208ENST00000414711 P4HA1P13674 534 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 CTSOP43234 321 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-208ENST00000414711 NCOA4Q13772 614 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 RFWD3Q6PCD5 774 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 RAB11FIP2Q7L804 512 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 ATCAYQ86WG3 371 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 SLC22A18ASQ8N1D0 253 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 SNX21Q969T3 373 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 MIB2Q96AX9 1013 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-208ENST00000414711 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 LRRK1Q38SD2 2015 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 ITPR3Q14573 2671 aa16.31■□□□□ 0.2
CPNE1-208ENST00000414711 AGFG2O95081 481 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 HGFP14210 728 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
CPNE1-208ENST00000414711 CYP2J2P51589 502 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 AGBL4Q5VU57 503 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 B3GNT8Q7Z7M8 397 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 NOX5Q96PH1 765 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 TWNKQ96RR1 684 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 PREBQ9HCU5 417 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 FZD3Q9NPG1 666 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 STIM2Q9P246 746 aa16.3■□□□□ 0.2
CPNE1-208ENST00000414711 HBS1LQ9Y450 684 aaKnown RBP16.3■□□□□ 0.2
CPNE1-208ENST00000414711 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
CPNE1-208ENST00000414711 AKT2P31751 481 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 DEFB133Q30KQ1 61 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 PITRM1Q5JRX3 1037 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 PIK3R6Q5UE93 754 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 RNF219Q5W0B1 726 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-208ENST00000414711 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 FIBINQ8TAL6 211 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 NAT6Q93015 286 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 SPAG5Q96R06 1193 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 DUSP16Q9BY84 665 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 AGPAT3Q9NRZ7 376 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 OLA1Q9NTK5 396 aaKnown RBP16.29■□□□□ 0.2
CPNE1-208ENST00000414711 PISDQ9UG56 409 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms