RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PDGFRAP16234 1089 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 NMT1P30419 496 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 IDUAP35475 653 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FLT3LGP49771 235 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 RASSF2P50749 326 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ARF3P61204 181 aaPredicted RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ARF1P84077 181 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ARHGAP1Q07960 439 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 SLC29A2Q14542 456 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ZC2HC1CQ53FD0 456 aaPredicted RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 LILRA6Q6PI73 481 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 MEX3BQ6ZN04 569 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 KRT73Q86Y46 540 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 SYTL1Q8IYJ3 562 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ATG16L2Q8NAA4 619 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 KCTD6Q8NC69 237 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CD99L2Q8TCZ2 262 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FAM216AQ8WUB2 273 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 AFG1LQ8WV93 481 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 DNAJC9Q8WXX5 260 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 GLG1Q92896 1179 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TUBGCP3Q96CW5 907 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 HES6Q96HZ4 224 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 RBM41Q96IZ5 413 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CEP170P1Q96L14 293 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TUBA1CQ9BQE3 449 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 B3GNT4Q9C0J1 378 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FAM192AQ9GZU8 254 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 LRMDAQ9H2I8 198 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 EHD1Q9H4M9 534 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 HPS4Q9NQG7 708 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 SCOCQ9UIL1 159 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 PCDHA2Q9Y5H9 948 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 IGSF9BQ9UPX0 1349 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ULK1O75385 1050 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FKBP9O95302 570 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CELA3AP09093 270 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 COL6A2P12110 1019 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 SP100P23497 879 aaPredicted RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 IGFALSP35858 605 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ACY1Q03154 408 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 MAPK7Q13164 816 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ADAM9Q13443 819 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FCRLBQ6BAA4 426 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FKBP9P1Q75LS8 142 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FITM2Q8N6M3 262 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FBXO15Q8NCQ5 510 aaPredicted RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 ASAP3Q8TDY4 903 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CKAP2Q8WWK9 683 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 TRIB2Q92519 343 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CCDC106Q9BWC9 280 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CELF4Q9BZC1 486 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 C1orf21Q9H246 121 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 FGFR1OP2Q9NVK5 253 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 CORO2BQ9UQ03 480 aa9.64□□□□□ -0.87
SNHG3-201ENST00000413987 MYH9P35579 1960 aaKnown RBP9.64□□□□□ -0.87
SNHG3-201ENST00000413987 RHPN2P1A8MT19 583 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NOL3O60936 208 aaKnown RBP9.63□□□□□ -0.87
SNHG3-201ENST00000413987 PTP4A3O75365 173 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NPPAP01160 153 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 H2AFZP0C0S5 128 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 CKBP12277 381 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 RARGP13631 454 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 HTD2P86397 168 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 FAM26FQ5R3K3 315 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 RNF220Q5VTB9 566 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 AADACL4Q5VUY2 407 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 H2AFVQ71UI9 128 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NT5DC3Q86UY8 548 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 C4orf19Q8IY42 314 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NXPE1Q8N323 547 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 Q8NFD4 153 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 KCNN1Q92952 543 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 ATP6V0A1Q93050 837 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 VPS50Q96JG6 964 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF668Q96K58 619 aaPredicted RBP9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TEKT5Q96M29 485 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TRIM51Q9BSJ1 452 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TRIM31Q9BZY9 425 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 BRD8Q9H0E9 1235 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 LRRC4CQ9HCJ2 640 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 STOML1Q9UBI4 398 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 PPM1HQ9ULR3 514 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 PEX11AO75192 247 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 FGGP02679 453 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 RGS2P41220 211 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 PRKCIP41743 596 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NR2C2P49116 596 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 STAT5BP51692 787 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms