RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 EBF2Q9HAK2 575 aa19.27■□□□□ 0.68
ITGA6-204ENST00000412899 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
ITGA6-204ENST00000412899 ADAMTS1Q9UHI8 967 aa19.27■□□□□ 0.68
ITGA6-204ENST00000412899 SLCO3A1Q9UIG8 710 aa19.27■□□□□ 0.68
ITGA6-204ENST00000412899 ITIH6Q6UXX5 1313 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 ITGAVP06756 1048 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 SLC9A1P19634 815 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 ABCB4P21439 1286 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 TACR2P21452 398 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 CD38P28907 300 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 RPL34P49207 117 aaKnown RBP19.26■□□□□ 0.67
ITGA6-204ENST00000412899 SMAD1Q15797 465 aaKnown RBP19.26■□□□□ 0.67
ITGA6-204ENST00000412899 VWA3BQ502W6 1294 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 ZC3H12AQ5D1E8 599 aaKnown RBP19.26■□□□□ 0.67
ITGA6-204ENST00000412899 DENND1BQ6P3S1 775 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 TRIM65Q6PJ69 517 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 BEND5Q7L4P6 421 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 STK40Q8N2I9 435 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 PDCD7Q8N8D1 485 aaKnown RBP19.26■□□□□ 0.67
ITGA6-204ENST00000412899 OR14C36Q8NHC7 312 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 BTN2A3PQ96KV6 586 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 KREMEN1Q96MU8 473 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 FAM129BQ96TA1 746 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 NDST4Q9H3R1 872 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 WDFY3Q8IZQ1 3526 aa19.26■□□□□ 0.67
ITGA6-204ENST00000412899 GTPBP10A4D1E9 387 aaKnown RBP19.25■□□□□ 0.67
ITGA6-204ENST00000412899 F5H5T6 163 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 PES1O00541 588 aaKnown RBP19.25■□□□□ 0.67
ITGA6-204ENST00000412899 MED7O43513 233 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 TRUB2O95900 331 aaKnown RBP19.25■□□□□ 0.67
ITGA6-204ENST00000412899 ADH1BP00325 375 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 IL1BP01584 269 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 WNT1P04628 370 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 GOT1P17174 413 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 C5AR1P21730 350 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 CCR5P51681 352 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 CAMK2BQ13554 666 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 SLC45A4Q5BKX6 768 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 TCP11X2Q5H9J9 407 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 C11orf57Q6ZUT1 292 aaPredicted RBP19.25■□□□□ 0.67
ITGA6-204ENST00000412899 AADATQ8N5Z0 425 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 ATP6V0D2Q8N8Y2 350 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 STK32AQ8WU08 396 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 POPDC2Q9HBU9 364 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 GDF3Q9NR23 364 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 SLC12A6Q9UHW9 1150 aa19.25■□□□□ 0.67
ITGA6-204ENST00000412899 PLXNA2O75051 1894 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 DMXL2Q8TDJ6 3036 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3DA0A087WVF3 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3IA0A087WXS9 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3EA0A087X179 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3KA0A087X1G2 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3FA6NER0 549 aaPredicted RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3LB9A6J9 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 ENC1O14682 589 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 LETM1O95202 739 aaPredicted RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 LDOC1O95751 146 aaPredicted RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3HP0C7X1 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 EEF1GP26641 437 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 PON1P27169 355 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 NUMBP49757 651 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 STK19P49842 368 aaPredicted RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 YWHAZP63104 245 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 SLC12A1Q13621 1099 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 ELAVL3Q14576 367 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 MIIPQ5JXC2 388 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3GQ6DHY5 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3CQ6IPX1 549 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 GJB7Q6PEY0 223 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 ENOSF1Q7L5Y1 443 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TMPRSS12Q86WS5 348 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TBC1D3Q8IZP1 549 aaPredicted RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 LRIG1Q96JA1 1093 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 SERAC1Q96JX3 654 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 CNDP2Q96KP4 475 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 FAM81BQ96LP2 452 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 SLC4A5Q9BY07 1137 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 SCUBE2Q9NQ36 999 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 TPX2Q9ULW0 747 aaKnown RBP19.24■□□□□ 0.67
ITGA6-204ENST00000412899 CNTN6Q9UQ52 1028 aa19.24■□□□□ 0.67
ITGA6-204ENST00000412899 ZFYVE26Q68DK2 2539 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 KNL1Q8NG31 2342 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 CABIN1Q9Y6J0 2220 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 E5RJQ4 531 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 YKT6O15498 198 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 THAP12O43422 761 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 PDGFRAP16234 1089 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 MZF1P28698 734 aaPredicted RBP19.23■□□□□ 0.67
ITGA6-204ENST00000412899 ARRB1P49407 418 aaPredicted RBP19.23■□□□□ 0.67
ITGA6-204ENST00000412899 ADPRHP54922 357 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 APBA1Q02410 837 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 SULT2A1Q06520 285 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.23■□□□□ 0.67
ITGA6-204ENST00000412899 CCAR2Q8N163 923 aaKnown RBP19.23■□□□□ 0.67
ITGA6-204ENST00000412899 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 FANCLQ9NW38 375 aa19.23■□□□□ 0.67
ITGA6-204ENST00000412899 APEX2Q9UBZ4 518 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms