RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RHOUQ7L0Q8 258 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TRABD2AQ86V40 505 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 CCDC170Q8IYT3 715 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 FSTL5Q8N475 847 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 LSM14AQ8ND56 463 aaKnown RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SUN3Q8TAQ9 357 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SOCS4Q8WXH5 440 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ASB10Q8WXI3 467 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 PERPQ96FX8 193 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 LENG8Q96PV6 779 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SPAG5Q96R06 1193 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 NR1H4Q96RI1 486 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 FNBP1Q96RU3 617 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ALG8Q9BVK2 526 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 CCDC134Q9H6E4 229 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TRPV4Q9HBA0 871 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TRIM36Q9NQ86 728 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TMLHEQ9NVH6 421 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 KCTD5Q9NXV2 234 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TAB2Q9NYJ8 693 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ANKFY1Q9P2R3 1169 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SLC25A10Q9UBX3 287 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 STEAP1Q9UHE8 339 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 RIMKLBQ9ULI2 386 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 SLC27A6Q9Y2P4 619 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 COL15A1P39059 1388 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ADGRA2Q96PE1 1338 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PIPSLA2A3N6 862 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 HNRNPRO43390 633 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PEX1O43933 1283 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SLU7O95391 586 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 ONECUT2O95948 504 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 RHOP08100 348 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SCP2P22307 547 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 EEF1DP29692 281 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 LIPAP38571 399 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 HNF4AP41235 474 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 GARSP41250 739 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 CLCN2P51788 898 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 RAD23AP54725 363 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 BLOC1S1P78537 153 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 UBXN1Q04323 297 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 AP1B1Q10567 949 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 BFSP1Q12934 665 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 TUBA3CQ13748 450 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 TTC31Q49AM3 519 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 ODF2Q5BJF6 829 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PLEKHS1Q5SXH7 462 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 GARNL3Q5VVW2 1013 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 DCLRE1AQ6PJP8 1040 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 MAVSQ7Z434 540 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SDCCAG8Q86SQ7 713 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 CAND1Q86VP6 1230 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 ERC1Q8IUD2 1116 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 BRSK2Q8IWQ3 736 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 ARL6IP6Q8N6S5 226 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 C11orf44Q8N8P7 122 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 GABPB2Q8TAK5 448 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PROKR1Q8TCW9 393 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 RUFY2Q8WXA3 655 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 VPS33AQ96AX1 596 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 RSPRY1Q96DX4 576 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 FBXL20Q96IG2 436 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PPP1R10Q96QC0 940 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 WDR24Q96S15 920 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 HAPLN3Q96S86 360 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 HTATIP2Q9BUP3 242 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 HERC2P3Q9BVR0 1158 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 APOL6Q9BWW8 343 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SEMA4BQ9NPR2 832 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SLC2A4RGQ9NR83 387 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 KLC4Q9NSK0 619 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 DECR2Q9NUI1 292 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 PPP1R14DQ9NXH3 145 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 EHD3Q9NZN3 535 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 WDR35Q9P2L0 1181 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 NKX1-2Q9UD57 310 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 NFU1Q9UMS0 254 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SH2B3Q9UQQ2 575 aa4.82□□□□□ -1.64
BRCA1-204ENST00000412061 REXO2Q9Y3B8 237 aaKnown RBP4.82□□□□□ -1.64
BRCA1-204ENST00000412061 SLC38A8A6NNN8 435 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 MYO1GB0I1T2 1018 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TAF4O00268 1085 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 YY2O15391 372 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TNFSF14O43557 240 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ENTPD3O75355 529 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 NXPH3O95157 252 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 PDE8BO95263 885 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 VNN1O95497 513 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ERBB2P04626 1255 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 THEGLP0DJG4 465 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 IFNAR1P17181 557 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TBXAS1P24557 533 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ICAM3P32942 547 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms