RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RAB3IPQ96QF0 476 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CLPBQ9H078 707 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 SMOC2Q9H3U7 446 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 OPA3Q9H6K4 179 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.22□□□□□ -1.57
LSM5-205ENST00000409952 RXFP3Q9NSD7 469 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 SPATS2LQ9NUQ6 558 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 SMPD4Q9NXE4 827 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ZNF536O15090 1300 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 TEX13CA0A0J9YWL9 993 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 CCDC195A0A1B0GUA6 201 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 A8MZ25 164 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 CPLX1O14810 134 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 LDLRAD4O15165 306 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 FMO6PO60774 539 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 IGHDP01880 384 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 CYP3A4P08684 503 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 CCDC175P0C221 793 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SELLP14151 372 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 ATF7P17544 494 aaPredicted RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 TLX1P31314 330 aaPredicted RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 TTKP33981 857 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 NRIP1P48552 1158 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 MTHFSP49914 203 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SEMA3BQ13214 749 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 CDSNQ15517 529 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 FAM214AQ32MH5 1076 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 PARP10Q53GL7 1025 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 UBAP2Q5T6F2 1119 aaKnown RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 ARHGAP40Q5TG30 622 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 FAM90A2PQ658T7 463 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SHQ1Q6PI26 577 aaKnown RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 CPLX2Q6PUV4 134 aaKnown RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 MTHFD1LQ6UB35 978 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 PET117Q6UWS5 81 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 DOK3Q7L591 496 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 PLPPR4Q7Z2D5 763 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 XYLT1Q86Y38 959 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.21□□□□□ -1.58
LSM5-205ENST00000409952 C11orf44Q8N8P7 122 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 NSUN7Q8NE18 718 aaKnown RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 OR6J1Q8NGC5 347 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 NPIPB3Q92617 1050 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 RABGGTAQ92696 567 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 FAM162AQ96A26 154 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SIPA1Q96FS4 1042 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 HAPLN3Q96S86 360 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 NPAS1Q99742 590 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.21□□□□□ -1.58
LSM5-205ENST00000409952 ANKRD2Q9GZV1 360 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 ABCG4Q9H172 646 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 TTC12Q9H892 705 aaPredicted RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 COPS7BQ9H9Q2 264 aaPredicted RBP5.21□□□□□ -1.58
LSM5-205ENST00000409952 PDE11AQ9HCR9 933 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 LTB4R2Q9NPC1 389 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 THAP1Q9NVV9 213 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 STEAP1Q9UHE8 339 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 SLC12A4Q9UP95 1085 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 ADAM18Q9Y3Q7 739 aa5.21□□□□□ -1.58
LSM5-205ENST00000409952 hCG_1809904A0A1W2PP81 198 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 A0A1W2PPE2 198 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 A0A1W2PR64 198 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 M0QZQ0 153 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 GRM8O00222 908 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 CTDSP2O14595 271 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 B3GALNT1O75752 331 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 PRSS23O95084 383 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 RB1P06400 928 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SPATA31D3P0C874 917 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 C6P13671 934 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 CD19P15391 556 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ZNF20P17024 532 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 CPOXP36551 454 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 DGKQP52824 942 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 TIRAPP58753 221 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 TLE3Q04726 772 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 R3HDM1Q15032 1099 aaKnown RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 C5orf22Q49AR2 442 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ZNF628Q5EBL2 1059 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 TCTN3Q6NUS6 607 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 EFCAB12Q6NXP0 572 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SLC30A9Q6PML9 568 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SPATA31D4Q6ZUB0 917 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 USP51Q70EK9 711 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 GPRIN1Q7Z2K8 1008 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 PIWIL3Q7Z3Z3 882 aaKnown RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 GLRX5Q86SX6 157 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 LCA5Q86VQ0 697 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 TICAM1Q8IUC6 712 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ARHGAP12Q8IWW6 846 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ZBTB8BQ8NAP8 495 aaPredicted RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 RNF169Q8NCN4 708 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 NEK9Q8TD19 979 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SECISBP2LQ93073 1101 aaKnown RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 PGAM5Q96HS1 289 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 LRIG1Q96JA1 1093 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 LMF1Q96S06 567 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms