RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 HOXB2P14652 356 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 RHOQP17081 205 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 CYLC1P35663 651 aaPredicted RBP22.99■■□□□ 1.27
PTCD3-203ENST00000409783 CTSOP43234 321 aaPredicted RBP22.99■■□□□ 1.27
PTCD3-203ENST00000409783 MAGEA1P43355 309 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 DGKEP52429 567 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 OXCT1P55809 520 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 IRF2BPLQ9H1B7 796 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 TMEM245Q9H330 911 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 RETREG1Q9H6L5 497 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 GRPEL1Q9HAV7 217 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 NDFIP2Q9NV92 336 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 ZSCAN32Q9NX65 697 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 PROSCO94903 275 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 ASLP04424 464 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 ATP5BP06576 529 aaKnown RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 PRKCHP24723 683 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 PXNP49023 591 aaPredicted RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 FNTBP49356 437 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 SLC25A11Q02978 314 aaKnown RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 TXNRD3NBQ6F5E7 133 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 KIAA1211LQ6NV74 962 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 RASSF3Q86WH2 238 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 PSTKQ8IV42 348 aaKnown RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 RFFLQ8WZ73 363 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 KCTD15Q96SI1 283 aaPredicted RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 PSMB7Q99436 277 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 BAG1Q99933 345 aaPredicted RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 FAM86C1Q9NVL1 165 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 TMEM248Q9NWD8 314 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 EBF1Q9UH73 591 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 REXO2Q9Y3B8 237 aaKnown RBP22.98■■□□□ 1.27
PTCD3-203ENST00000409783 PCDHA13Q9Y5I0 950 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 RAD54BQ9Y620 910 aa22.98■■□□□ 1.27
PTCD3-203ENST00000409783 CCDC163A0A0D9SF12 145 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 LILRB5O75023 590 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 MOCS3O95396 460 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 APBB3O95704 486 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 RHOCP08134 193 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 NUMBP49757 651 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 NRLP54845 237 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 NHLH1Q02575 133 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 E2F5Q15329 346 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 RNF219Q5W0B1 726 aaPredicted RBP22.97■■□□□ 1.27
PTCD3-203ENST00000409783 HEATR6Q6AI08 1181 aaKnown RBP22.97■■□□□ 1.27
PTCD3-203ENST00000409783 SDE2Q6IQ49 451 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 RWDD4Q6NW29 188 aaKnown RBP22.97■■□□□ 1.27
PTCD3-203ENST00000409783 RHOT2Q8IXI1 618 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 TSTD1Q8NFU3 115 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 ATOH1Q92858 354 aaPredicted RBP22.97■■□□□ 1.27
PTCD3-203ENST00000409783 EPAS1Q99814 870 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 DHX35Q9H5Z1 703 aaKnown RBP22.97■■□□□ 1.27
PTCD3-203ENST00000409783 TFR2Q9UP52 801 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 ERVW-1Q9UQF0 538 aa22.97■■□□□ 1.27
PTCD3-203ENST00000409783 A0A0D9SEW6 157 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 ILVBLA1L0T0 632 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 CREB3O43889 395 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 HLA-EP13747 358 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 OR1E1P30953 314 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 ECT2LQ008S8 904 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 BOLA3Q53S33 107 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 C6orf118Q5T5N4 469 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 WDR5BQ86VZ2 330 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 LONP2Q86WA8 852 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 KDM1BQ8NB78 822 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 POLMQ9NP87 494 aaPredicted RBP22.96■■□□□ 1.27
PTCD3-203ENST00000409783 PLA2G4CQ9UP65 541 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 PCDHGA2Q9Y5H1 932 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 R4GN57 208 aa22.96■■□□□ 1.27
PTCD3-203ENST00000409783 GOLGA6L3A6NEY3 463 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 WASH4PA8MWX3 477 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 RARAP10276 462 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 EPHB2P29323 1055 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 MAN1A1P33908 653 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 HTR7P34969 479 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 NBL1P41271 181 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 MAPKAPK2P49137 400 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 SPA17Q15506 151 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 DPYSL2Q16555 572 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 FNDC3BQ53EP0 1204 aaKnown RBP22.95■■□□□ 1.26
PTCD3-203ENST00000409783 KCNT1Q5JUK3 1230 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 SERPINA13PQ6UXR4 307 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 ZNF783Q6ZMS7 281 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 MDGA1Q8NFP4 955 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 OR7D4Q8NG98 312 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 TEKT4Q8WW24 435 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 NOL6Q9H6R4 1146 aaKnown RBP22.95■■□□□ 1.26
PTCD3-203ENST00000409783 LCMT1Q9UIC8 334 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 SLCO3A1Q9UIG8 710 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 VPS28Q9UK41 221 aa22.95■■□□□ 1.26
PTCD3-203ENST00000409783 NUP205Q92621 2012 aa22.94■■□□□ 1.26
PTCD3-203ENST00000409783 NYNRINQ9P2P1 1898 aaKnown RBP22.94■■□□□ 1.26
PTCD3-203ENST00000409783 TCRBV21S2A2A0A5A6 115 aa22.94■■□□□ 1.26
PTCD3-203ENST00000409783 RCCD1A6NED2 376 aa22.94■■□□□ 1.26
PTCD3-203ENST00000409783 SRPRAP08240 638 aaKnown RBP22.94■■□□□ 1.26
PTCD3-203ENST00000409783 GABRG2P18507 467 aa22.94■■□□□ 1.26
PTCD3-203ENST00000409783 STK19P49842 368 aaPredicted RBP22.94■■□□□ 1.26
PTCD3-203ENST00000409783 VASPP50552 380 aaPredicted RBP22.94■■□□□ 1.26
PTCD3-203ENST00000409783 HADHBP55084 474 aaKnown RBP22.94■■□□□ 1.26
PTCD3-203ENST00000409783 TAS2R40P59535 323 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms