RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SH3GL1Q99961 368 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 NDEL1Q9GZM8 345 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 COPS7BQ9H9Q2 264 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 RNF225M0QZC1 329 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 YBEYP58557 167 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 IRF2BP1Q8IU81 584 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 TAGAPQ8N103 731 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 BTN2A3PQ96KV6 586 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 FAM111AQ96PZ2 611 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 APPL1Q9UKG1 709 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 STARD13Q9Y3M8 1113 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 DDHD2O94830 711 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 TRIM16O95361 564 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 RFC2P35250 354 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 HALP42357 657 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 RPL21P46778 160 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 ERFP50548 548 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 PHKG1Q16816 387 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 MREGQ8N565 214 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 ADAM32Q8TC27 787 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 THTPAQ9BU02 230 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 UBOX5O94941 541 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 SNUPNO95149 360 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 APOL2Q9BQE5 337 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 ARHGAP26Q9UNA1 814 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 SNED1Q8TER0 1413 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 THRAP10827 490 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 HEXDCQ8WVB3 486 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 SYNDIG1Q9H7V2 258 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 FBXL21Q9UKT6 434 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 ARVCFO00192 962 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 KPNA3O00505 521 aaPredicted RBP17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 WEE1P30291 646 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 MAP3K10Q02779 954 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 OTOAQ7RTW8 1153 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 REPS1Q96D71 796 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 SPASTQ9UBP0 616 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 MAPRE3Q9UPY8 281 aa17.11■□□□□ 0.33
PCDHA13-202ENST00000409494 RBL1P28749 1068 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 INPP1P49441 399 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 CNTN1Q12860 1018 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 POU6F1Q14863 301 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ZNF438Q7Z4V0 828 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 MLPHQ9BV36 600 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 KIAA1522Q9P206 1035 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 TMEM191CA6NGB0 347 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 KCNK1O00180 336 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 FSCN2O14926 492 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 MRPS35P82673 323 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 SLC26A9Q7LBE3 791 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ETNK2Q9NVF9 386 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ASB3Q9Y575 518 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ENDOD1O94919 500 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 GJB1P08034 283 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 IGFBP4P22692 258 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 TKTP29401 623 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 RAP1GAP2Q684P5 730 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ARID3BQ8IVW6 561 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 XPNPEP1Q9NQW7 623 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 POLG2Q9UHN1 485 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 TNPO3Q9Y5L0 923 aaKnown RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 BMP10O95393 424 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PFKMP08237 780 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PECAM1P16284 738 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 BRCC3P46736 316 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PRKAA1Q13131 559 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 ZDHHC20Q5W0Z9 365 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 SEL1L3Q68CR1 1132 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 PLEKHA7Q6IQ23 1121 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 MAGEB10Q96LZ2 347 aaPredicted RBP17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 COQ4Q9Y3A0 265 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 TCHHQ07283 1943 aa17.1■□□□□ 0.33
PCDHA13-202ENST00000409494 A0A087X1B8 175 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 PHC3Q8NDX5 983 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 TUBGCP3Q96CW5 907 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 TLE6Q9H808 572 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 KDM3BQ7LBC6 1761 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 VPS4BO75351 444 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms