RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 FAM86B1E9PN63 330 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GNB5O14775 395 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 PJA2O43164 708 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 MED24O75448 989 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 SEMA3DO95025 777 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CER1O95813 267 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ASLP04424 464 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM86B2P0C5J1 330 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CASP14P31944 242 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FGL2Q14314 439 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 KRT72Q14CN4 511 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 AMZ1Q400G9 498 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 BEND6Q5SZJ8 279 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ARMC12Q5T9G4 340 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 LYSMD4Q5XG99 296 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ALKBH2Q6NS38 261 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TFAP2DQ7Z6R9 452 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 RNF135Q8IUD6 432 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TRAPPC5Q8IUR0 188 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 LINC00301Q8NCQ3 95 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 EXD1Q8NHP7 514 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CYP2W1Q8TAV3 490 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GRAMD1AQ96CP6 724 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 C17orf80Q9BSJ5 609 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ASPSCR1Q9BZE9 553 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 BCAS3Q9H6U6 928 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CCDC162PA2VCL2 907 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 SLC38A8A6NNN8 435 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM25AB3EWG3 89 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM25CB3EWG5 89 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM25GB3EWG6 89 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GCATO75600 419 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 PRLP01236 227 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CDH2P19022 906 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TKTP29401 623 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TUBP50607 506 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 MYL6P60660 151 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ARHGAP1Q07960 439 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 EFR3AQ14156 821 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 IKBIPQ70UQ0 350 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 Q7L0L9 218 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 SLFN11Q7Z7L1 901 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GKN2Q86XP6 184 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM129CQ86XR2 697 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TOP6BLQ8N6T0 577 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 OTULINQ96BN8 352 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 INPP4AQ96PE3 977 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CCSER1Q9C0I3 900 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CCSER2Q9H7U1 834 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 METTL5Q9NRN9 209 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 DERAQ9Y315 318 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ATP9BO43861 1147 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 OCM2P0CE71 109 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 OCMP0CE72 109 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 GLRA2P23416 452 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TP53BP2Q13625 1128 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 C16orf72Q14CZ0 275 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 RBBP7Q16576 425 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 KBTBD12Q3ZCT8 623 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ACAD11Q709F0 780 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 AGGF1Q8N302 714 aaeCLIP7.45□□□□□ -1.221e-10■□□□□ 9.6
SCN9A-202ENST00000409435 IPMKQ8NFU5 416 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 IGSF21Q96ID5 467 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ATP13A3Q9H7F0 1226 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ABCB6Q9NP58 842 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FANCFQ9NPI8 374 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 INTS13Q9NVM9 706 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 NUDT5Q9UKK9 219 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ZNF214Q9UL59 606 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 EDARQ9UNE0 448 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CPQQ9Y646 472 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 IQANK1A0A1B0GTG1 560 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ZBTB39O15060 712 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 SLC31A1O15431 190 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 PDE9AO76083 593 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 APBB3O95704 486 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 MAPTP10636 758 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 PSMC3P17980 439 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 HSPA13P48723 471 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 C6orf132Q5T0Z8 1188 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 IL27RAQ6UWB1 636 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 SUN5Q8TC36 379 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 BLOC1S5Q8TDH9 187 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 VMP1Q96GC9 406 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 MS4A4AQ96JQ5 239 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ALKBH4Q9NXW9 302 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CLIC5Q9NZA1 410 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 PCDHGB4Q9UN71 923 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 F8VP50 259 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TRDMT1O14717 391 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 TRIM24O15164 1050 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 ANXA9O76027 345 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 CHRM3P20309 590 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 MAT2AP31153 395 aaKnown RBP7.45□□□□□ -1.22
SCN9A-202ENST00000409435 EMC10Q5UCC4 262 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAAH2Q6GMR7 532 aa7.45□□□□□ -1.22
SCN9A-202ENST00000409435 FAM45BPQ6NSW5 357 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms