RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TBXAS1P24557 533 aaPredicted RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 EPHA8P29322 1005 aaPredicted RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 CASP1P29466 404 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SLC8A1P32418 973 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 GALCP54803 685 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBX4P57082 545 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 RHDQ02161 417 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 CFHR1Q03591 330 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SULT2A1Q06520 285 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 ADIGQ0VDE8 80 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 CETN1Q12798 172 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 HNRNPA1L2Q32P51 320 aaKnown RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 RAB41Q5JT25 222 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 FAM46CQ5VWP2 391 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 RESP18Q5W5W9 173 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TMEM215Q68D42 235 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3GQ6DHY5 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3CQ6IPX1 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 NAPEPLDQ6IQ20 393 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 NCEH1Q6PIU2 408 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 Q6ZVU0 165 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 ADIPOR2Q86V24 386 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 DHX40Q8IX18 779 aaKnown RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3Q8IZP1 549 aaPredicted RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 ZNF248Q8NDW4 579 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 OR14C36Q8NHC7 312 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 IRGQQ8WZA9 623 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 EDEM1Q92611 657 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 RNF34Q969K3 372 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SERPINB11Q96P15 392 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TSG101Q99816 390 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 KCTD10Q9H3F6 313 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 PRORYQ9H606 182 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 ERVMER34-1Q9H9K5 563 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 RAB20Q9NX57 234 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 STIM2Q9P246 746 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TJP2Q9UDY2 1190 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 ADAMTS1Q9UHI8 967 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SFMBT1Q9UHJ3 866 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SERTAD1Q9UHV2 236 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 CLEC4EQ9ULY5 219 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 DMTF1Q9Y222 760 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 CKAP5Q14008 2032 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 AKAP13Q12802 2813 aa8.02□□□□□ -1.12
LSM5-202ENST00000409292 J3QKU1 62 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 MID1O15344 667 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SLC7A4O43246 635 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ACSL4O60488 711 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SIN3BO75182 1162 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 FBXO21O94952 628 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 IL1BP01584 269 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 APOEP02649 317 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 IGHV4-34P06331 123 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 TRIM49P0CI25 452 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 TRIM49CP0CI26 452 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 VSIG8P0DPA2 414 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 VDRP11473 427 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ZNF18P17022 549 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ITPKBP27987 946 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 CSKP41240 450 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 PSMD8P48556 350 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ACADVLP49748 655 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 DUSP3P51452 185 aaPredicted RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 RAD23BP54727 409 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 PCBP4P57723 403 aaKnown RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 TMPRSS3P57727 454 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 CXADRP78310 365 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SLC12A1Q13621 1099 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ELAVL3Q14576 367 aaKnown RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 STILQ15468 1287 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 NFIL3Q16649 462 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SETMARQ53H47 684 aaPredicted RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 PIK3R6Q5UE93 754 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 TCERG1LQ5VWI1 586 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 LAYNQ6UX15 382 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 IQCHQ86VS3 1027 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 MARCH9Q86YJ5 346 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 MMAAQ8IVH4 418 aaKnown RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 CARNMT1Q8N4J0 409 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 MFSD2AQ8NA29 543 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SLC4A11Q8NBS3 891 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 RBBP8NLQ8NC74 664 aaPredicted RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 KIAA0895Q8NCT3 520 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 FIBINQ8TAL6 211 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SAP25Q8TEE9 199 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 KCTD13Q8WZ19 329 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 TTC17Q96AE7 1141 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 PAGE5Q96GU1 130 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 CCDC114Q96M63 670 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 ABCG4Q9H172 646 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 APOBEC3GQ9HC16 384 aaKnown RBP8.02□□□□□ -1.13
LSM5-202ENST00000409292 TSPAN16Q9UKR8 245 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 PCDHA7Q9UN72 937 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 SHROOM3Q8TF72 1996 aa8.02□□□□□ -1.13
LSM5-202ENST00000409292 NEMP2A6NFY4 417 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms