RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 NET1Q7Z628 596 aaPredicted RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 SLC44A2Q8IWA5 706 aaPredicted RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 GLMNQ92990 594 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 RNF145Q96MT1 663 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 OMDQ99983 421 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 PHACTR1Q9C0D0 580 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 DDX5P17844 614 aaKnown RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 TM4SF1P30408 202 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 RGS2P41220 211 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 RHOAP61586 193 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 POLD3Q15054 466 aaPredicted RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 NEDD8Q15843 81 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 ASTE1Q2TB18 679 aaPredicted RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 PGS1Q32NB8 556 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 ARCQ7LC44 396 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 CLNKQ7Z7G1 428 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 UNC93AQ86WB7 457 aa16.06■□□□□ 0.16
SSFA2-202ENST00000409001 FAM120BQ96EK7 910 aaKnown RBP16.06■□□□□ 0.16
SSFA2-202ENST00000409001 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PSMD12O00232 456 aaPredicted RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PGM3O95394 542 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 NFKB1P19838 968 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 DEFA1P59665 94 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 DEFA3P59666 94 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 STK32CQ86UX6 486 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 FAM126BQ8IXS8 530 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CARNMT1Q8N4J0 409 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 FIG4Q92562 907 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ZNF670Q9BS34 389 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 TAS2R13Q9NYV9 303 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PPP2R3BQ9Y5P8 575 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 NFASCO94856 1347 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 SYNCRIPO60506 623 aaKnown RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 LDLRP01130 860 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 COX4I1P13073 169 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ANPEPP15144 967 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 RAD23AP54725 363 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PWP1Q13610 501 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 METTL6Q8TCB7 284 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 UBXN6Q9BZV1 441 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PALMDQ9NP74 551 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 POLG2Q9UHN1 485 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 MYRFQ9Y2G1 1151 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 UMODL1Q5DID0 1318 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 SLIT3O75094 1523 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CKMP06732 381 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ATP6V1C1P21283 382 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CSTF3Q12996 717 aaKnown RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 SCARA3Q6AZY7 606 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PLEKHA8Q96JA3 519 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CPXM1Q96SM3 734 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ACE2Q9BYF1 805 aaPredicted RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 C2orf71A6NGG8 1288 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 RGS5O15539 181 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 BUD23O43709 281 aaKnown RBP16.05■□□□□ 0.16
SSFA2-202ENST00000409001 EPHA3P29320 983 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 NMUR2Q9GZQ4 415 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ELOVL6Q9H5J4 265 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 PARVBQ9HBI1 364 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
SSFA2-202ENST00000409001 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 LRPAP1P30533 357 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 C16orf72Q14CZ0 275 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 RAB42Q8N4Z0 105 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 ATG16L2Q8NAA4 619 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 TLCD1Q96CP7 247 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 BDH2Q9BUT1 245 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 ADGRE3Q9BY15 652 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 PAIP1Q9H074 479 aaKnown RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 RMND5AQ9H871 391 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 YDJCA8MPS7 323 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 MYL4P12829 197 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 GRIA4P48058 902 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 BNIP1Q12981 228 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 C11orf74Q86VG3 221 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 SLC41A1Q8IVJ1 513 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 F8W810 466 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 PDHXO00330 501 aa16.04■□□□□ 0.16
SSFA2-202ENST00000409001 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
SSFA2-202ENST00000409001 USP4Q13107 963 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms