RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 PDE2AO00408 941 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 FCARP24071 287 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 TARSP26639 723 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 CDKN2BP42772 138 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 SLC11A2P49281 568 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 TPI1P60174 286 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 RPS24P62847 133 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 RING1Q06587 406 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 SCAPQ12770 1279 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 LONRF2Q1L5Z9 754 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 RSPO4Q2I0M5 234 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 ALFQ53S48 1182 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 ANKRD20A8PQ5CZ79 823 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 SEL1L2Q5TEA6 688 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 Q6ZNB5 142 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 HTR3DQ70Z44 454 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 TFAP2DQ7Z6R9 452 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 ZNF683Q8IZ20 524 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 CELF5Q8N6W0 485 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 PQLC3Q8N755 202 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 PCDH19Q8TAB3 1148 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 TSC1Q92574 1164 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 PBKQ96KB5 322 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 PRICKLE1Q96MT3 831 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 RPRD1AQ96P16 312 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 PRMT1Q99873 361 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 MAK16Q9BXY0 300 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 OSBPL8Q9BZF1 889 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 OSBPL6Q9BZF3 934 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 C10orf88Q9H8K7 445 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 DLL3Q9NYJ7 618 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 PLK2Q9NYY3 685 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 GDE1Q9NZC3 331 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
GPC3-203ENST00000406757 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 LSM7Q9UK45 103 aaKnown RBP8.6□□□□□ -1.03
GPC3-203ENST00000406757 E2F8A0AVK6 867 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 F5H5T6 163 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 H3BRJ5 948 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 CST8O60676 142 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 TBL1XO60907 577 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ECI2O75521 394 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 FGGP02679 453 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ARSAP15289 507 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 PFKLP17858 780 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 TCP1P17987 556 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 ERCC2P18074 760 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 EPHB2P29323 1055 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ARL4AP40617 200 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 USP4Q13107 963 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 SEMA3BQ13214 749 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 PDK2Q15119 407 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ADGRF1Q5T601 910 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 VITQ6UXI7 678 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ZNF852Q6ZMS4 543 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 RFX8Q6ZV50 586 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 TMEM25Q86YD3 366 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 SLC13A5Q86YT5 568 aaPredicted RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 CREG2Q8IUH2 290 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 MAP7D3Q8IWC1 876 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 FAM71BQ8TC56 605 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 BPIFB1Q8TDL5 484 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 C1orf54Q8WWF1 131 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 CLDN23Q96B33 292 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 RBM41Q96IZ5 413 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 CELF6Q96J87 481 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 C1orf74Q96LT6 269 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 EPAS1Q99814 870 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 DCLK3Q9C098 648 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 EBF3Q9H4W6 596 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 DUS2Q9NX74 493 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 CLEC4EQ9ULY5 219 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 NDRG2Q9UN36 371 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 NEU3Q9UQ49 428 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 R3HDM2Q9Y2K5 976 aaKnown RBP8.59□□□□□ -1.03
GPC3-203ENST00000406757 PCDHGA2Q9Y5H1 932 aa8.59□□□□□ -1.03
GPC3-203ENST00000406757 HELZP42694 1942 aaKnown RBP8.58□□□□□ -1.04
GPC3-203ENST00000406757 MIA3Q5JRA6 1907 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 DRGXA6NNA5 263 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 APOL1O14791 398 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 NCAM2O15394 837 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 TUBB4AP04350 444 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 PECAM1P16284 738 aaPredicted RBP8.58□□□□□ -1.04
GPC3-203ENST00000406757 PRLRP16471 622 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 MAGEA9P43362 315 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 IFNAR2P48551 515 aa8.58□□□□□ -1.04
GPC3-203ENST00000406757 AIF1P55008 147 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms