RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZYG11BQ9C0D3 744 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 KLC2Q9H0B6 622 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 RETREG1Q9H6L5 497 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 IL21Q9HBE4 155 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 ZNF334Q9HCZ1 680 aaPredicted RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 IGLV3-10A0A075B6K4 115 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 CCDC195A0A1B0GUA6 201 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 GOLGA6BA6NDN3 693 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 RHOQP17081 205 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 PFKLP17858 780 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 PPIDQ08752 370 aaKnown RBP21.56■■□□□ 1.04
TPM1-208ENST00000404484 ATAT1Q5SQI0 421 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 CHSY1Q86X52 802 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 LRRC49Q8IUZ0 686 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 GJD3Q8N144 294 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 NPWQ8N729 165 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 TSEN2Q8NCE0 465 aaKnown RBP21.56■■□□□ 1.04
TPM1-208ENST00000404484 LGMNQ99538 433 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 PHF7Q9BWX1 381 aaPredicted RBP21.56■■□□□ 1.04
TPM1-208ENST00000404484 PHACTR1Q9C0D0 580 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 VANGL2Q9ULK5 521 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 ATP8A1Q9Y2Q0 1164 aa21.56■■□□□ 1.04
TPM1-208ENST00000404484 FARP1Q9Y4F1 1045 aaPredicted RBP21.56■■□□□ 1.04
TPM1-208ENST00000404484 C19orf67A6NJJ6 358 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 TNFRSF10AO00220 468 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 OPHN1O60890 802 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 HOXA9P31269 272 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 GARSP41250 739 aaKnown RBP21.55■■□□□ 1.04
TPM1-208ENST00000404484 PMS2P54278 862 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 ARHGEF18Q6ZSZ5 1173 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 C14orf80Q86SX3 495 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 TMEM150AQ86TG1 271 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 ZNF683Q8IZ20 524 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 UBLCP1Q8WVY7 318 aaPredicted RBP21.55■■□□□ 1.04
TPM1-208ENST00000404484 DDX50Q9BQ39 737 aaKnown RBP21.55■■□□□ 1.04
TPM1-208ENST00000404484 POMKQ9H5K3 350 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 ASAH2Q9NR71 780 aa21.55■■□□□ 1.04
TPM1-208ENST00000404484 MTCL1Q9Y4B5 1905 aaKnown RBP21.55■■□□□ 1.04
TPM1-208ENST00000404484 A0A0A0MRY4 1105 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 F5H5T6 163 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 CHADO15335 359 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 ACSL4O60488 711 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 LATS1O95835 1130 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 VAV1P15498 845 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 GABRR2P28476 465 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 HSD17B3P37058 310 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 MTHFRP42898 656 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 BASP1P80723 227 aaKnown RBP21.54■■□□□ 1.04
TPM1-208ENST00000404484 RAP1GAP2Q684P5 730 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 PPP1R21Q6ZMI0 780 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 B4GALNT4Q76KP1 1039 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 TRMT10CQ7L0Y3 403 aaKnown RBP21.54■■□□□ 1.04
TPM1-208ENST00000404484 CCDC25Q86WR0 208 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 TMC8Q8IU68 726 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 CPT1BQ92523 772 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 ZNF707Q96C28 371 aaPredicted RBP21.54■■□□□ 1.04
TPM1-208ENST00000404484 P2RY11Q96G91 374 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 RIPOR3Q96MK2 946 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 SPATA13Q96N96 652 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 PRMT1Q99873 361 aaKnown RBP21.54■■□□□ 1.04
TPM1-208ENST00000404484 KLF16Q9BXK1 252 aaPredicted RBP21.54■■□□□ 1.04
TPM1-208ENST00000404484 TMEM248Q9NWD8 314 aa21.54■■□□□ 1.04
TPM1-208ENST00000404484 C2orf78A6NCI8 922 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 DRGXA6NNA5 263 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 PAPLNO95428 1278 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 MBL2P11226 248 aaPredicted RBP21.53■■□□□ 1.04
TPM1-208ENST00000404484 TACR2P21452 398 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 NAT8LQ8N9F0 302 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 LEMD2Q8NC56 503 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 PRCCQ92733 491 aaPredicted RBP21.53■■□□□ 1.04
TPM1-208ENST00000404484 PKNOX2Q96KN3 472 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 NECTIN4Q96NY8 510 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 RPRD1AQ96P16 312 aaPredicted RBP21.53■■□□□ 1.04
TPM1-208ENST00000404484 VAT1Q99536 393 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 FRMD8Q9BZ67 464 aaPredicted RBP21.53■■□□□ 1.04
TPM1-208ENST00000404484 PABPC3Q9H361 631 aaKnown RBP21.53■■□□□ 1.04
TPM1-208ENST00000404484 TRPC7Q9HCX4 862 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 RAB6BQ9NRW1 208 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 ANAPC1Q9H1A4 1944 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 RNF103O00237 685 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 STC2O76061 302 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 OLFM2O95897 454 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 HNRNPA1P09651 372 aaKnown RBP eCLIP21.53■■□□□ 1.04
TPM1-208ENST00000404484 FDFT1P37268 417 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 NDST2P52849 883 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 HSP90B2PQ58FF3 399 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 ARTNQ5T4W7 220 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 FBXL22Q6P050 247 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 NLRP14Q86W24 1093 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 RELL1Q8IUW5 271 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 CCDC13Q8IYE1 715 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 ATPAF2Q8N5M1 289 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 CCDC33Q8N5R6 958 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 CCDC110Q8TBZ0 833 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 TSGA13Q96PP4 275 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 LRRC3Q9BY71 257 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 ZDHHC7Q9NXF8 308 aa21.53■■□□□ 1.04
TPM1-208ENST00000404484 LOC730098B7Z3J9 87 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 HDCP19113 662 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 CORO1AP31146 461 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms