RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CFAP157Q5JU67 520 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 RSPH3Q86UC2 560 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 TMEM216Q9P0N5 145 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 USP3Q9Y6I4 520 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 PEX1O43933 1283 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 CCDC130P13994 396 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 MGAT1P26572 445 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 CCDC153Q494R4 210 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 LPCAT4Q643R3 524 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 SLC26A9Q7LBE3 791 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 DEFB107AQ8IZN7 70 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 FBXW8Q8N3Y1 598 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 COLGALT1Q8NBJ5 622 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 CPB2Q96IY4 423 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 B3GNT5Q9BYG0 378 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
CCDC47-202ENST00000403162 SSX2IPQ9Y2D8 614 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 CITO14578 2027 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 HTTP42858 3142 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 SORBS2O94875 1100 aaKnown RBP20.29■□□□□ 0.84
CCDC47-202ENST00000403162 F2P00734 622 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 ACAT1P24752 427 aaKnown RBP20.29■□□□□ 0.84
CCDC47-202ENST00000403162 PEX2P28328 305 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 SCNN1AP37088 669 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 AQP4P55087 323 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 FSCBQ5H9T9 825 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 ZNF484Q5JVG2 852 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 SDCCAG8Q86SQ7 713 aaPredicted RBP20.29■□□□□ 0.84
CCDC47-202ENST00000403162 ACOT1Q86TX2 421 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 ISL2Q96A47 359 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 GORASP1Q9BQQ3 440 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 CYP4F11Q9HBI6 524 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 PCDHB12Q9Y5F1 795 aa20.29■□□□□ 0.84
CCDC47-202ENST00000403162 OPHN1O60890 802 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 PABPC4LP0CB38 370 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 VCLP18206 1134 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 GP5P40197 560 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 GARSP41250 739 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 MAGEA12P43365 314 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 ATXN1P54253 815 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 SESN2P58004 480 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CUL3Q13618 768 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 LRRC36Q1X8D7 754 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 FRMD7Q6ZUT3 714 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 KBTBD6Q86V97 674 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 PIP4K2CQ8TBX8 421 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CCDC124Q96CT7 223 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 BTBD9Q96Q07 612 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 MAGEB5Q9BZ81 275 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 PRDM16Q9HAZ2 1276 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 FAM49BQ9NUQ9 324 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 ARHGAP26Q9UNA1 814 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CDY2AQ9Y6F7 541 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CDY1Q9Y6F8 540 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 COX4I1P13073 169 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CPA3P15088 417 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 NCF2P19878 526 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 TYK2P29597 1187 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 MTTPP55157 894 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 TBL3Q12788 808 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 ITGA9Q13797 1035 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 MFSD10Q14728 455 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 PPM1JQ5JR12 505 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 VWA5B1Q5TIE3 1220 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 PHTF2Q8N3S3 785 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 HAPLN3Q96S86 360 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 CPNE1Q99829 537 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 MRPL45Q9BRJ2 306 aaKnown RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 RTKNQ9BST9 563 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 VCX3AQ9NNX9 186 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 RCOR3Q9P2K3 495 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-202ENST00000403162 ADAM28Q9UKQ2 775 aa20.28■□□□□ 0.84
CCDC47-202ENST00000403162 A0A087WZ62 844 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 H3BNX3 289 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 STK10O94804 968 aaKnown RBP20.27■□□□□ 0.84
CCDC47-202ENST00000403162 RAG1P15918 1043 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 GRTP1Q5TC63 336 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 EPGNQ6UW88 154 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 HPS6Q86YV9 775 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 CCDC185Q8N715 623 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 PPP1R13LQ8WUF5 828 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 KCNK16Q96T55 309 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 FDXACB1Q9BRP7 624 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-202ENST00000403162 HMX1Q9NP08 348 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-202ENST00000403162 TXNDC16Q9P2K2 825 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 MFHAS1Q9Y4C4 1052 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 NR2E3Q9Y5X4 410 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 COMMD3-BMI1R4GMX3 469 aa20.27■□□□□ 0.84
CCDC47-202ENST00000403162 MYO18AQ92614 2054 aaKnown RBP20.27■□□□□ 0.84
CCDC47-202ENST00000403162 KPNA6O60684 536 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 SERPINB6P35237 376 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 NUMBP49757 651 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 PSEN2P49810 448 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 PURAQ00577 322 aaKnown RBP20.27■□□□□ 0.83
CCDC47-202ENST00000403162 GRIK4Q16099 956 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 METTL21CQ5VZV1 264 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 NME8Q8N427 588 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 LGMNQ99538 433 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 SHCBP1LQ9BZQ2 653 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms