RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 CDC16Q13042 620 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 CAMK2GQ13555 558 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 VSIG10LQ86VR7 867 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 SEPT8Q92599 483 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 WNT8BQ93098 351 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 CERS2Q96G23 380 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 APOL4Q9BPW4 351 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 ELOVL4Q9GZR5 314 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 KRT84Q9NSB2 600 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 UTP6Q9NYH9 597 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 PEX1O43933 1283 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 SERPINA6P08185 405 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 NEK3P51956 506 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 FCGRTP55899 365 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 DDR2Q16832 855 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 CEP78Q5JTW2 689 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 OTUD3Q5T2D3 398 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 SWT1Q5T5J6 900 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 TRABD2AQ86V40 505 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 FAM126BQ8IXS8 530 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 ZNF670Q9BS34 389 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 A1CFQ9NQ94 594 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 TPRKBQ9Y3C4 175 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 GNG14A0A1W2PPG7 69 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 PSMD12O00232 456 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 SERPINI2O75830 405 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 AKAP5P24588 427 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 C15orf59Q2T9L4 293 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 B3GNT6Q6ZMB0 384 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 FAM183BPQ6ZVS7 135 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 RNF145Q96MT1 663 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 DDX18Q9NVP1 670 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 WNT7AO00755 349 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 DDX3YO15523 660 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 SYNCRIPO60506 623 aaKnown RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 LTFP02788 710 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 ZNF7P17097 686 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 PSMB4P28070 264 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 LRPAP1P30533 357 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 CYP2C18P33260 490 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
TSC2-204ENST00000401874 DHDDSQ86SQ9 333 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 SEMA4DQ92854 862 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 PCDHB5Q9Y5E4 795 aa17.01■□□□□ 0.31
TSC2-204ENST00000401874 RTP1P59025 263 aa17■□□□□ 0.31
TSC2-204ENST00000401874 SQLEQ14534 574 aa17■□□□□ 0.31
TSC2-204ENST00000401874 TMEM86AQ8N2M4 240 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
TSC2-204ENST00000401874 ACTRT2Q8TDY3 377 aa17■□□□□ 0.31
TSC2-204ENST00000401874 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ENOPH1Q9UHY7 261 aa17■□□□□ 0.31
TSC2-204ENST00000401874 EDF1O60869 148 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 CALCAP01258 141 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ANPEPP15144 967 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ATP6V1C1P21283 382 aa17■□□□□ 0.31
TSC2-204ENST00000401874 TTKP33981 857 aa17■□□□□ 0.31
TSC2-204ENST00000401874 PKNOX1P55347 436 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ELAVL2Q12926 359 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 C16orf72Q14CZ0 275 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ATP13A4Q4VNC1 1196 aa17■□□□□ 0.31
TSC2-204ENST00000401874 B3GALNT2Q8NCR0 500 aa17■□□□□ 0.31
TSC2-204ENST00000401874 MBOAT7Q96N66 472 aa17■□□□□ 0.31
TSC2-204ENST00000401874 HOXC6P09630 235 aa17■□□□□ 0.31
TSC2-204ENST00000401874 SLC25A3Q00325 362 aa17■□□□□ 0.31
TSC2-204ENST00000401874 C1DQ13901 141 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 ZACNQ401N2 412 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ALG3Q92685 438 aa17■□□□□ 0.31
TSC2-204ENST00000401874 MTERF3Q96E29 417 aa17■□□□□ 0.31
TSC2-204ENST00000401874 TMEM169Q96HH4 297 aa17■□□□□ 0.31
TSC2-204ENST00000401874 PAIP1Q9H074 479 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
TSC2-204ENST00000401874 CXCL11O14625 94 aa17■□□□□ 0.31
TSC2-204ENST00000401874 FGF10O15520 208 aaPredicted RBP17■□□□□ 0.31
TSC2-204ENST00000401874 ZNF862O60290 1169 aa17■□□□□ 0.31
TSC2-204ENST00000401874 GPC1P35052 558 aa17■□□□□ 0.31
TSC2-204ENST00000401874 ECM1Q16610 540 aa17■□□□□ 0.31
TSC2-204ENST00000401874 HGSNATQ68CP4 663 aa17■□□□□ 0.31
TSC2-204ENST00000401874 MFSD5Q6N075 450 aa17■□□□□ 0.31
TSC2-204ENST00000401874 C11orf96Q7Z7L8 435 aa17■□□□□ 0.31
TSC2-204ENST00000401874 CAMK1DQ8IU85 385 aa17■□□□□ 0.31
TSC2-204ENST00000401874 HASPINQ8TF76 798 aa17■□□□□ 0.31
TSC2-204ENST00000401874 PURBQ96QR8 312 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 SNRNP25Q9BV90 132 aaKnown RBP17■□□□□ 0.31
TSC2-204ENST00000401874 NDEL1Q9GZM8 345 aa17■□□□□ 0.31
TSC2-204ENST00000401874 TKTL2Q9H0I9 626 aa17■□□□□ 0.31
TSC2-204ENST00000401874 SNCAIPQ9Y6H5 919 aa17■□□□□ 0.31
TSC2-204ENST00000401874 LTA4HP09960 611 aaKnown RBP16.99■□□□□ 0.31
TSC2-204ENST00000401874 PIK3R1P27986 724 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 ALDH6A1Q02252 535 aaKnown RBP16.99■□□□□ 0.31
TSC2-204ENST00000401874 SREBF2Q12772 1141 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 STK32CQ86UX6 486 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 RDH11Q8TC12 318 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 METTL6Q8TCB7 284 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 RORBQ92753 470 aa16.99■□□□□ 0.31
TSC2-204ENST00000401874 TIMM13Q9Y5L4 95 aaPredicted RBP16.99■□□□□ 0.31
TSC2-204ENST00000401874 KRT36O76013 467 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms