RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 JCHAINP01591 159 aa12□□□□□ -0.49
SKA3-203ENST00000400018 MZF1P28698 734 aaPredicted RBP12□□□□□ -0.49
SKA3-203ENST00000400018 OR1E1P30953 314 aa12□□□□□ -0.49
SKA3-203ENST00000400018 HARS2P49590 506 aaKnown RBP12□□□□□ -0.49
SKA3-203ENST00000400018 SATB1Q01826 763 aa12□□□□□ -0.49
SKA3-203ENST00000400018 MSS51Q4VC12 460 aa12□□□□□ -0.49
SKA3-203ENST00000400018 IZUMO3Q5VZ72 239 aa12□□□□□ -0.49
SKA3-203ENST00000400018 ANKMY2Q8IV38 441 aa12□□□□□ -0.49
SKA3-203ENST00000400018 CMTM8Q8IZV2 173 aa12□□□□□ -0.49
SKA3-203ENST00000400018 SCML4Q8N228 414 aa12□□□□□ -0.49
SKA3-203ENST00000400018 NTAN1Q96AB6 310 aa12□□□□□ -0.49
SKA3-203ENST00000400018 PRMT1Q99873 361 aaKnown RBP12□□□□□ -0.49
SKA3-203ENST00000400018 GDF3Q9NR23 364 aa12□□□□□ -0.49
SKA3-203ENST00000400018 NYNRINQ9P2P1 1898 aaKnown RBP12□□□□□ -0.49
SKA3-203ENST00000400018 SMIM23A6NLE4 172 aa12□□□□□ -0.49
SKA3-203ENST00000400018 BNIP3LO60238 219 aa12□□□□□ -0.49
SKA3-203ENST00000400018 ACSL4O60488 711 aa12□□□□□ -0.49
SKA3-203ENST00000400018 TBX10O75333 385 aa12□□□□□ -0.49
SKA3-203ENST00000400018 MT-CYBP00156 380 aaPredicted RBP12□□□□□ -0.49
SKA3-203ENST00000400018 IGLV3-27P01718 113 aa12□□□□□ -0.49
SKA3-203ENST00000400018 RB1P06400 928 aa12□□□□□ -0.49
SKA3-203ENST00000400018 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
SKA3-203ENST00000400018 AVPR1AP37288 418 aa12□□□□□ -0.49
SKA3-203ENST00000400018 COPS2P61201 443 aa12□□□□□ -0.49
SKA3-203ENST00000400018 SCAPQ12770 1279 aa12□□□□□ -0.49
SKA3-203ENST00000400018 BEND6Q5SZJ8 279 aaPredicted RBP12□□□□□ -0.49
SKA3-203ENST00000400018 SYCE2Q6PIF2 218 aa12□□□□□ -0.49
SKA3-203ENST00000400018 MAATS1Q7Z4T9 603 aa12□□□□□ -0.49
SKA3-203ENST00000400018 TMEM25Q86YD3 366 aa12□□□□□ -0.49
SKA3-203ENST00000400018 OR6K2Q8NGY2 324 aa12□□□□□ -0.49
SKA3-203ENST00000400018 ASIC4Q96FT7 647 aa12□□□□□ -0.49
SKA3-203ENST00000400018 BTN2A3PQ96KV6 586 aa12□□□□□ -0.49
SKA3-203ENST00000400018 C9orf72Q96LT7 481 aa12□□□□□ -0.49
SKA3-203ENST00000400018 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
SKA3-203ENST00000400018 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 K7ERQ8 282 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 TBL1XO60907 577 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 PTPN2P17706 415 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 TFDP2Q14188 446 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 IHHQ14623 411 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 PPP2R5DQ14738 602 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 DUSP6Q16828 381 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 MANEALQ5VSG8 457 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ARHGAP18Q8N392 663 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
SKA3-203ENST00000400018 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
SKA3-203ENST00000400018 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 TBC1D31Q96DN5 1066 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 RPL10LQ96L21 214 aaKnown RBP11.99□□□□□ -0.49
SKA3-203ENST00000400018 RNF103O00237 685 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ZBTB24O43167 697 aaPredicted RBP11.99□□□□□ -0.49
SKA3-203ENST00000400018 PSMB4P28070 264 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 LMAN1P49257 510 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 GRM2Q14416 872 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 CCDC13Q8IYE1 715 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ZNF567Q8N184 647 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ATP6V0D2Q8N8Y2 350 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 SORCS1Q8WY21 1168 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ATP2A3Q93084 1043 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
SKA3-203ENST00000400018 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 PRKD2Q9BZL6 878 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 ZDHHC18Q9NUE0 388 aa11.99□□□□□ -0.49
SKA3-203ENST00000400018 MT-CO1P00395 513 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 APRTP07741 180 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 SLC10A7Q0GE19 358 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 BRMS1LQ5PSV4 323 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 FNBP1LQ5T0N5 605 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 CCDC91Q7Z6B0 441 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 NLRP14Q86W24 1093 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 AGGF1Q8N302 714 aaeCLIP11.98□□□□□ -0.49
SKA3-203ENST00000400018 CNTD1Q8N815 330 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 ZNF366Q8N895 744 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 TFB1MQ8WVM0 346 aaKnown RBP11.98□□□□□ -0.49
SKA3-203ENST00000400018 OLFM3Q96PB7 478 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 HAPLN3Q96S86 360 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 OXCT2Q9BYC2 517 aaPredicted RBP11.98□□□□□ -0.49
SKA3-203ENST00000400018 SEMA4AQ9H3S1 761 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 RAB21Q9UL25 225 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 SSX2IPQ9Y2D8 614 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.98□□□□□ -0.49
SKA3-203ENST00000400018 DOCK4Q8N1I0 1966 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 COL4A4P53420 1690 aaPredicted RBP11.98□□□□□ -0.49
SKA3-203ENST00000400018 F5H5T6 163 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 GKP32189 559 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 MAGEA9P43362 315 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 FNTAP49354 379 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 ITIH3Q06033 890 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 HEATR6Q6AI08 1181 aaKnown RBP11.98□□□□□ -0.49
SKA3-203ENST00000400018 CES3Q6UWW8 571 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 IFT20Q8IY31 132 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 APCDD1Q8J025 514 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 HTR3CQ8WXA8 447 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 CPT1BQ92523 772 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 FGF13Q92913 245 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms