RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SLC26A2P50443 739 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 CASP9P55211 416 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 ULK2Q8IYT8 1036 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 DEFB119Q8N690 84 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 EIF1ADQ8N9N8 165 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TDRD5Q8NAT2 981 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 DNERQ8NFT8 737 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 REPS1Q96D71 796 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TBATAQ96M53 351 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TTLL2Q9BWV7 592 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TAF1DQ9H5J8 278 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 PAK5Q9P286 719 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 NTSP30990 170 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TRAPPC11Q7Z392 1133 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM129CQ86XR2 697 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 EPHX4Q8IUS5 362 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 CNPY4Q8N129 248 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 C19orf18Q8NEA5 215 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 RFFLQ8WZ73 363 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 RELTQ969Z4 430 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SERHL2Q9H4I8 314 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SERHLQ9NQF3 203 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 NOX1Q9Y5S8 564 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 CCDC162PA2VCL2 907 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 M0R3G1 203 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 GPM6BQ13491 265 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 HECTD3Q5T447 861 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 P3H2Q8IVL5 708 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 GSPT2Q8IYD1 628 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SPATA4Q8NEY3 305 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 DPF2Q92785 391 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 RIT2Q99578 217 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SUPT7LO94864 414 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 ITPKBP27987 946 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SCNN1GP51170 649 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 OC90Q02509 493 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 STX3Q13277 289 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 PMEPA1Q969W9 287 aa11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 SPATA6Q9NWH7 488 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-216ENST00000399638 A6NCN8 305 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 MUTP22033 750 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 KELP23276 732 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 ADCY4Q8NFM4 1077 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF333Q96JL9 665 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM53CQ9NYF3 392 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF624Q9P2J8 865 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 HOXC6P09630 235 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CXCL8P10145 99 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 TBX2Q13207 712 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CLCA4Q14CN2 919 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 LIX1Q8N485 282 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 TSPAN14Q8NG11 270 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CAVIN3Q969G5 261 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC38A3Q99624 504 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 GPRC5CQ9NQ84 441 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 UBA2Q9UBT2 640 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 VDRP11473 427 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CCND1P24385 295 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 HNF4AP41235 474 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 RPIAP49247 311 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 GRIK3Q13003 919 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 RPTNQ6XPR3 784 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 LRRC70Q7Z2Q7 622 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 GAD1Q99259 594 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 APOL2Q9BQE5 337 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 SH3BGRL2Q9UJC5 107 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM237AA0A1B0GTK4 181 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 PSMD11O00231 422 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CA12O43570 354 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 VAV1P15498 845 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 STK4Q13043 487 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 KLHL12Q53G59 568 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 SMPDL3BQ92485 455 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 C19orf60Q96EN9 201 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 DPEP2Q9H4A9 486 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 TMEM265A0A087WTH1 108 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 VIPP01282 170 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 MAPK10P53779 464 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms