RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 NLRP4Q96MN2 994 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 NAP1L3Q99457 506 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 TSG101Q99816 390 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 WDR18Q9BV38 432 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 RAB34Q9BZG1 259 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPRC5CQ9NQ84 441 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 IARS2Q9NSE4 1012 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 MYO1AQ9UBC5 1043 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR45Q9Y5Y3 372 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 COL4A5P29400 1685 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 MAST2Q6P0Q8 1798 aa6.41□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPATA31C1P0DKV0 1188 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 EDN3P14138 238 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 EDNRBP24530 442 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 AOAHP28039 575 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CST5P28325 142 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAMLGP49069 296 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 VAV2P52735 878 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 AGERQ15109 404 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 POU4F3Q15319 338 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 DPYSL2Q16555 572 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TYSND1Q2T9J0 566 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM153CQ494X1 144 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 C2CD6Q53TS8 623 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 AADACL2Q6P093 401 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 SUSD1Q6UWL2 747 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 PALB2Q86YC2 1186 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TUSC5Q8IXB3 177 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMIGD2Q96BF3 282 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 KTI12Q96EK9 354 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 RNF125Q96EQ8 232 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 KRT12Q99456 494 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ERP44Q9BS26 406 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 IGFLR1Q9H665 355 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 GDAP2Q9NXN4 497 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 PI4KBQ9UBF8 816 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TLK1Q9UKI8 766 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 BAG5Q9UL15 447 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CNOT6Q9ULM6 557 aaKnown RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 LAMA2P24043 3122 aaKnown RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 A0A088AWK7 358 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATMINO43313 823 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 DLGAP3O95886 979 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 SNHG28P0DPA3 235 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 DLATP10515 647 aaKnown RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ESRRAP11474 423 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 BMP3P12645 472 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 HPGDP15428 266 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 GMFBP60983 142 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 RAB1AP62820 205 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 GRSF1Q12849 480 aaKnown RBP eCLIP6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 RALGDSQ12967 914 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CHIT1Q13231 466 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 SLC12A1Q13621 1099 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 FUT11Q495W5 492 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMEM119Q4V9L6 283 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 MSS51Q4VC12 460 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMEM177Q53S58 311 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 PPP1R21Q6ZMI0 780 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 OTOAQ7RTW8 1153 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 CNTN4Q8IWV2 1026 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 TAGAPQ8N103 731 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATP11CQ8NB49 1132 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF671Q8TAW3 534 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 FGD4Q96M96 766 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 OSBPL9Q96SU4 736 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRRX2Q99811 253 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZFYVE1Q9HBF4 777 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 PSME4Q14997 1843 aa6.4□□□□□ -1.38
TRAPPC13-202ENST00000399438 MYO3BQ8WXR4 1341 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 A0A1W2PQC6 194 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 PTGES3LE9PB15 166 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NFKBIEO00221 500 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 PSMD14O00487 310 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 LAD1O00515 517 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NFIBO00712 420 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 SMAD6O43541 496 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 TLL1O43897 1013 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 RNF40O75150 1001 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 S100A9P06702 114 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 BCRP11274 1271 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 ACPPP15309 386 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 EIF2AK2P19525 551 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CLCN4P51793 760 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CDR1P51861 262 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 FKBP3Q00688 224 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CAP1Q01518 475 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 FMO1Q01740 532 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 GUCY2DQ02846 1103 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 MAMLD1Q13495 774 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 ITGA7Q13683 1181 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 DPYSQ14117 519 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 PDIA5Q14554 519 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 HADHQ16836 314 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms