RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
ITSN1-211ENST00000399355 LRIG2O94898 1065 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 GNAZP19086 355 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 STX3Q13277 289 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 RIPOR1Q6ZS17 1223 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.48
ITSN1-211ENST00000399355 NSL1Q96IY1 281 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 BTBD10Q9BSF8 475 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 CASP8AP2Q9UKL3 1982 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 MUC3AQ02505 3323 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 ZSWIM8A7E2V4 1837 aa12.02□□□□□ -0.48
ITSN1-211ENST00000399355 BPGMP07738 259 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 CD52P31358 61 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 ATICP31939 592 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 TEDDM1Q5T9Z0 273 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SLC26A9Q7LBE3 791 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 TNFRSF12AQ9NP84 129 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SNX15Q9NRS6 342 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PPP2R3BQ9Y5P8 575 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 A0A0A0MRY4 1105 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 GAS2O43903 313 aaKnown RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 NPR3P17342 541 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PTPN3P26045 913 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 TAF6P49848 677 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SLC26A2P50443 739 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PKNOX1P55347 436 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 NME5P56597 212 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 MUM1Q2TAK8 710 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 CCNJLQ8IV13 435 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 MFSD6LQ8IWD5 586 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 GBP7Q8N8V2 638 aaPredicted RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SCG3Q8WXD2 468 aaKnown RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 EXT2Q93063 718 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 BHMTQ93088 406 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SPATA13Q96N96 652 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SORT1Q99523 831 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 ZNF670Q9BS34 389 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PHACTR1Q9C0D0 580 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 ATP6AP2A0A1C7CYW4 349 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 BCLAF3A2AJT9 711 aaKnown RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 ATP6AP2O75787 350 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 HNRNPLP14866 589 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 CCND1P24385 295 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PRKCHP24723 683 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 PDCD2Q16342 344 aaPredicted RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 FRMD7Q6ZUT3 714 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 RAPH1Q70E73 1250 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 OR10T2Q8NGX3 314 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 MIEF2Q96C03 454 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 QKIQ96PU8 341 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 NUF2Q9BZD4 464 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
ITSN1-211ENST00000399355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.496e-6■■■□□ 14.8
ITSN1-211ENST00000399355 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
ITSN1-211ENST00000399355 WDFY4Q6ZS81 3184 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 FAM159BA6NKW6 160 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SMAPO00193 183 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 CFLARO15519 480 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 NELFEP18615 380 aaKnown RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 GABRB3P28472 473 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SLC1A6P48664 564 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 IHHQ14623 411 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 FAM110BQ8TC76 370 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 C20orf96Q9NUD7 363 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 TM9SF1O15321 606 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 GRK4P32298 578 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 ETFBP38117 255 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 CCNHP51946 323 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 TPI1P60174 286 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SEPT6Q14141 434 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 LDLRAD1Q5T700 205 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 MBLAC2Q68D91 279 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 ZNF354CQ86Y25 554 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SCN4BQ8IWT1 228 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 ZSCAN18Q8TBC5 510 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 OLFM3Q96PB7 478 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 VRTNQ9H8Y1 702 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 RRAGCQ9HB90 399 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 CDY2AQ9Y6F7 541 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 KIAA0100Q14667 2235 aaKnown RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 GPR39O43194 453 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 TGM2P21980 687 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 PDK2Q15119 407 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 DDR2Q16832 855 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 SLC25A52Q3SY17 297 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 ESRP1Q6NXG1 681 aaKnown RBP12.01□□□□□ -0.49
ITSN1-211ENST00000399355 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
ITSN1-211ENST00000399355 TRPV1Q8NER1 839 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms