RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TRIM66O15016 1216 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 FDFT1P37268 417 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 CCT5P48643 541 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 GEMIN4P57678 1058 aaKnown RBP18.84■□□□□ 0.61
MBD1-208ENST00000398493 RPL10AP62906 217 aaKnown RBP18.84■□□□□ 0.61
MBD1-208ENST00000398493 PAFAH1B3Q15102 231 aaKnown RBP18.84■□□□□ 0.61
MBD1-208ENST00000398493 SCAMP5Q8TAC9 235 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 CCDC110Q8TBZ0 833 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 RNF34Q969K3 372 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 OLFM3Q96PB7 478 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 S1PR5Q9H228 398 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 SFXN1Q9H9B4 322 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 ETNK1Q9HBU6 452 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 PRDM6Q9NQX0 595 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 DZANK1Q9NVP4 752 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 ZDHHC7Q9NXF8 308 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 SENP1Q9P0U3 644 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 CTNNAL1Q9UBT7 734 aa18.84■□□□□ 0.61
MBD1-208ENST00000398493 ATXN2Q99700 1313 aaKnown RBP18.83■□□□□ 0.6
MBD1-208ENST00000398493 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 NCAM2O15394 837 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 HMGA1P17096 107 aaKnown RBP18.83■□□□□ 0.6
MBD1-208ENST00000398493 CXCR3P49682 368 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 SEC24CP53992 1094 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 NRLP54845 237 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 GPX6P59796 221 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 TPI1P60174 286 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 GAD2Q05329 585 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 TMED2Q15363 201 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 MSS51Q4VC12 460 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 CAPN12Q6ZSI9 719 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 DNAJB7Q7Z6W7 309 aaPredicted RBP18.83■□□□□ 0.6
MBD1-208ENST00000398493 HS6ST3Q8IZP7 471 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 ADAM32Q8TC27 787 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 EDEM1Q92611 657 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 LRRC39Q96DD0 335 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 SPATA17Q96L03 361 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 EPAS1Q99814 870 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 RABEP2Q9H5N1 569 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 ABCC13Q9NSE7 274 aa18.83■□□□□ 0.6
MBD1-208ENST00000398493 DNMT3BQ9UBC3 853 aaKnown RBP18.83■□□□□ 0.6
MBD1-208ENST00000398493 RRP15Q9Y3B9 282 aaKnown RBP18.83■□□□□ 0.6
MBD1-208ENST00000398493 RASA4BC9J798 803 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 RASA4O43374 803 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 PAPLNO95428 1278 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 APRTP07741 180 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 HNRNPA1P09651 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
MBD1-208ENST00000398493 BRAFP15056 766 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 TPSB2P20231 275 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 HOXA9P31269 272 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 SLC5A3P53794 718 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 EPHB3P54753 998 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 NTHL1P78549 312 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 DPYSQ14117 519 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 TPSAB1Q15661 275 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 BTBD8Q5XKL5 378 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 RTL10Q7L3V2 364 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 BHLHA9Q7RTU4 235 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 ZNF473Q8WTR7 871 aaKnown RBP18.82■□□□□ 0.6
MBD1-208ENST00000398493 MAML1Q92585 1016 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 PSMG2Q969U7 264 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 LRRC3Q9BY71 257 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 BRD8Q9H0E9 1235 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 UBE2ZQ9H832 354 aaPredicted RBP18.82■□□□□ 0.6
MBD1-208ENST00000398493 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
MBD1-208ENST00000398493 NKIRAS1Q9NYS0 192 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
MBD1-208ENST00000398493 RABGEF1Q9UJ41 708 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 GGA2Q9UJY4 613 aa18.82■□□□□ 0.6
MBD1-208ENST00000398493 BANF1O75531 89 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 KCNA5P22460 613 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 SSTR1P30872 391 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 ELK3P41970 407 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 CDK16Q00536 496 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 AP1B1Q10567 949 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 IFRD2Q12894 506 aaPredicted RBP18.81■□□□□ 0.6
MBD1-208ENST00000398493 DENND5BQ6ZUT9 1274 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 MICALCLQ6ZW33 695 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 CCNYQ8ND76 341 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 MAFAQ8NHW3 353 aaPredicted RBP18.81■□□□□ 0.6
MBD1-208ENST00000398493 DYDC1Q8WWB3 177 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 CHMP6Q96FZ7 201 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 CYTH2Q99418 400 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 ACSS3Q9H6R3 686 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 TMPRSS4Q9NRS4 437 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 EURLQ9NYK6 297 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 MAGED2Q9UNF1 606 aaPredicted RBP18.81■□□□□ 0.6
MBD1-208ENST00000398493 DOCK6Q96HP0 2047 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 CLUHO75153 1309 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 A0A0A0MRY4 1105 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 TMEM120BA0PK00 339 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 DCLK1O15075 740 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 MFSD11O43934 449 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 OPHN1O60890 802 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 GSTA2P09210 222 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 SRGAP2BP0DMP2 458 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 KRT15P19012 456 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 YWHAGP61981 247 aaKnown RBP eCLIP18.81■□□□□ 0.6
MBD1-208ENST00000398493 PPARDQ03181 441 aa18.81■□□□□ 0.6
MBD1-208ENST00000398493 ANKRD20A2Q5SQ80 823 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms