RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PPIL2Q13356 520 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MARK2Q7KZI7 788 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PSTKQ8IV42 348 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 EPAS1Q99814 870 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 POMKQ9H5K3 350 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 THAP1Q9NVV9 213 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGEF38Q9NXL2 777 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 HBS1LQ9Y450 684 aaKnown RBP5.04□□□□□ -1.6
SMAD4-202ENST00000398417 RRN3P2A6NIE6 340 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 DCXO43602 365 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 VAPBO95292 243 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 TSPAN8P19075 237 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 PTPN9P43378 593 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 MPP3Q13368 585 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 GRM3Q14832 879 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SPANXN3Q5MJ09 141 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ICA1LQ8NDH6 482 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FAM136AQ96C01 138 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 SNX27Q96L92 541 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 KCNK16Q96T55 309 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 WDCPQ9H6R7 721 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 KCNK13Q9HB14 408 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGEF4Q9NR80 690 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 C2CD2Q9Y426 696 aa5.04□□□□□ -1.6
SMAD4-202ENST00000398417 FAM72CH0Y354 149 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 THRAP10827 490 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TPSB2P20231 275 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NPY2RP49146 381 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SLC12A1Q13621 1099 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TPSAB1Q15661 275 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 GPR162Q16538 588 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FAM72AQ5TYM5 149 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FAM72DQ6L9T8 149 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 LRRC8EQ6NSJ5 796 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NET1Q7Z628 596 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 KCNMB4Q86W47 210 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CHSY1Q86X52 802 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FAM72BQ86X60 149 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CCNJLQ8IV13 435 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 WNT8BQ93098 351 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 LRRC39Q96DD0 335 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CDRT15Q96T59 188 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NDEL1Q9GZM8 345 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TKTL2Q9H0I9 626 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 IL1RL2Q9HB29 575 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CDYLQ9Y232 598 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 IPPQ9Y573 584 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MDM4O15151 490 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 USP17L7P0C7H9 530 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FAM200BP0CF97 657 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 VAV1P15498 845 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CRHR1P34998 444 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 DSG1Q02413 1049 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ANKRD20A4Q4UJ75 823 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NAPEPLDQ6IQ20 393 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PTAR1Q7Z6K3 402 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 AFAP1L2Q8N4X5 818 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 LZICQ8WZA0 190 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 EFHD2Q96C19 240 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 QKIQ96PU8 341 aaKnown RBP eCLIP5.03□□□□□ -1.62e-6■■■■□ 21.8
SMAD4-202ENST00000398417 SERPINI1Q99574 410 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SEMA6AQ9H2E6 1030 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 COPS7BQ9H9Q2 264 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 E7ESA3 106 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 KIF3CO14782 793 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MAGEC1O60732 1142 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MPOP05164 745 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PFKMP08237 780 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 NELFEP18615 380 aaKnown RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 GRIK1P39086 918 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PNPLA4P41247 253 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TOMM20Q15388 145 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TBCCQ15814 346 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 HABP4Q5JVS0 413 aaKnown RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MAP3K21Q5TCX8 1036 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 THEMIS2Q5TEJ8 643 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SPATA2LQ8IUW3 424 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TNS4Q8IZW8 715 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MZB1Q8WU39 189 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MYLPFQ96A32 169 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MFSD3Q96ES6 412 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 KLHL5Q96PQ7 755 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 FAM193BQ96PV7 902 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 EURLQ9NYK6 297 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 UBAP1Q9NZ09 502 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF180Q9UJW8 692 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 PSAT1Q9Y617 370 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 RGPD8O14715 1765 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MAP3K13O43283 966 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 SEC24DO94855 1032 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 GM2AP17900 193 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 EDNRBP24530 442 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 GRK2P25098 689 aa5.03□□□□□ -1.6
SMAD4-202ENST00000398417 TKTP29401 623 aaKnown RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 MSX2P35548 267 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-202ENST00000398417 CHRNA4P43681 627 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms