RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 NRDCO43847 1150 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 TNNT1P13805 278 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 POLR2EP19388 210 aaKnown RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 COMTP21964 271 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 HOXC13P31276 330 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 EIF4HQ15056 248 aaKnown RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 DPYSL2Q16555 572 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 C6orf118Q5T5N4 469 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 CHPFQ8IZ52 775 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 TPCN2Q8NHX9 752 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 ERLEC1Q96DZ1 483 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 ZNF830Q96NB3 372 aaPredicted RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 FEM1AQ9BSK4 669 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 TMEM248Q9NWD8 314 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 CACNA2D2Q9NY47 1150 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 A0A0D9SEW6 157 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 MACROD2A1Z1Q3 448 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 BTNL10A8MVZ5 291 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 WASH3PC4AMC7 463 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 SGK1O00141 431 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 CTSOP43234 321 aaPredicted RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 SATB1Q01826 763 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 RFX8Q6ZV50 586 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 SETD3Q86TU7 594 aaPredicted RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 C1orf210Q8IVY1 113 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 UCMAQ8WVF2 138 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 CWC15Q9P013 229 aaKnown RBP26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 VPS28Q9UK41 221 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 ALG6Q9Y672 507 aa26.06■■□□□ 1.76
TMEM55B-202ENST00000398020 CACNA1IQ9P0X4 2223 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 CHURC1-FNTBB4DL54 471 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 DAPK3O43293 454 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 SPOPO43791 374 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 MOCS3O95396 460 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 DAAM2Q86T65 1068 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 ALG14Q96F25 216 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 PCDH18Q9HCL0 1135 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 OR51B4Q9Y5P0 310 aa26.05■■□□□ 1.76
TMEM55B-202ENST00000398020 ADAM23O75077 832 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 ATG13O75143 517 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 CD48P09326 243 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 SLC1A1P43005 524 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 CDH6P55285 790 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 OXCT1P55809 520 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 SLC12A1Q13621 1099 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 KRT81Q14533 505 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 ZNF234Q14588 700 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 ZFYVE27Q5T4F4 411 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 TXLNBQ8N3L3 684 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 RTL3Q8N8U3 475 aaKnown RBP26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 OR7D4Q8NG98 312 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 TTC17Q96AE7 1141 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 CATSPERBQ9H7T0 1116 aa26.04■■□□□ 1.76
TMEM55B-202ENST00000398020 TIMM44O43615 452 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 KRT7P08729 469 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 HNRNPLP14866 589 aaKnown RBP eCLIP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 PTPRNQ16849 979 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 TSSK4Q6SA08 328 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 ACDQ96AP0 544 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 IER2Q9BTL4 223 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 KCNF1Q9H3M0 494 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 THAP10Q9P2Z0 257 aaPredicted RBP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 MMP17Q9ULZ9 603 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 PLA2G4CQ9UP65 541 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 FGF10O15520 208 aaPredicted RBP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 LAMTOR5O43504 91 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 ATP5BP06576 529 aaKnown RBP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 DLDP09622 509 aaKnown RBP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 NTSR1P30989 418 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 ARL4AP40617 200 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 IL12RB1P42701 662 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 CXCL12P48061 93 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 MAPKAPK2P49137 400 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 PLK1P53350 603 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 DMC1Q14565 340 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 C11orf63Q6NUN7 778 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 POLNQ7Z5Q5 900 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 KCTD6Q8NC69 237 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 KCNV2Q8TDN2 545 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 RPL10LQ96L21 214 aaKnown RBP26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 SPON2Q9BUD6 331 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 STON1Q9Y6Q2 735 aa26.03■■□□□ 1.76
TMEM55B-202ENST00000398020 ILVBLA1L0T0 632 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 H3BRJ5 948 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 CCDC175P0C221 793 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 ERCC2P18074 760 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 HTR7P34969 479 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 CCR3P51677 355 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 GNA12Q03113 381 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 MMRN1Q13201 1228 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 FNDC3BQ53EP0 1204 aaKnown RBP26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 SYT13Q7L8C5 426 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 TRMT11Q7Z4G4 463 aaKnown RBP26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 MAML2Q8IZL2 1156 aaPredicted RBP26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 ZNF366Q8N895 744 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 CSPG4P5Q96PW8 444 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 CALN1Q9BXU9 219 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 RAD54BQ9Y620 910 aa26.02■■□□□ 1.76
TMEM55B-202ENST00000398020 MUC22E2RYF6 1773 aaPredicted RBP26.01■■□□□ 1.75
TMEM55B-202ENST00000398020 SNAP91O60641 907 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms