RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PDZD4Q76G19 769 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 C14orf80Q86SX3 495 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 ANKS4BQ8N8V4 417 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 MAB21L3Q8N8X9 362 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 TBC1D31Q96DN5 1066 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 INTS9Q9NV88 658 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 SMPD4Q9NXE4 827 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 LAMA3Q16787 3333 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 TLDC2A0PJX2 215 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 TP73O15350 636 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 STC2O76061 302 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 RBP3P10745 1247 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 IVDP26440 423 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 CCR2P41597 374 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 LMNB2Q03252 620 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 SLC10A2Q12908 348 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 ACBD5Q5T8D3 534 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 ICE2Q659A1 982 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 GSTA5Q7RTV2 222 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 ZC3H18Q86VM9 953 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 CDCA3Q99618 268 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 NSRP1Q9H0G5 558 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 MAP3K6O95382 1288 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 ITGAVP06756 1048 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 IRF1P10914 325 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 HOXC13P31276 330 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 PAFAH1B3Q15102 231 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 ARTNQ5T4W7 220 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 RAP1GAP2Q684P5 730 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 PIGWQ7Z7B1 504 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 CCDC89Q8N998 374 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 CCDC197Q8NCU1 140 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 SHKBP1Q8TBC3 707 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 PPP2R3CQ969Q6 453 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 ZNF707Q96C28 371 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 TCEAL4Q96EI5 215 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 SELENOSQ9BQE4 189 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 TMEM121Q9BTD3 319 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 CDC42EP4Q9H3Q1 356 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 C10orf88Q9H8K7 445 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 DTLQ9NZJ0 730 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 ASIC3Q9UHC3 531 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 VANGL2Q9ULK5 521 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 NEU3Q9UQ49 428 aa19.85■□□□□ 0.77
PDLIM2-204ENST00000397760 H7C0C1 242 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 TTC4O95801 387 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 POU2F2P09086 479 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 CORO1AP31146 461 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 HNRNPH1P31943 449 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 ATP5OP48047 213 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 SLC11A2P49281 568 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 IFI35P80217 286 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 STXBP5Q5T5C0 1151 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 GRASPQ7Z6J2 395 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 DENND1CQ8IV53 801 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 CCDC13Q8IYE1 715 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 C12orf76Q8N812 135 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 LEMD2Q8NC56 503 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 MDM1Q8TC05 714 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 CCHCR1Q8TD31 782 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 ZFRQ96KR1 1074 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 IGFLR1Q9H665 355 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 CATSPERBQ9H7T0 1116 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 NEU2Q9Y3R4 380 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 CPQQ9Y646 472 aa19.84■□□□□ 0.77
PDLIM2-204ENST00000397760 MFSD11O43934 449 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 ACSL4O60488 711 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 CKMP06732 381 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 NTHL1P78549 312 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 KCNC3Q14003 757 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 DARS2Q6PI48 645 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 BZW1Q7L1Q6 419 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 CHSY1Q86X52 802 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 ZNF683Q8IZ20 524 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 ALLCQ8N6M5 410 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 VN1R2Q8NFZ6 395 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 EPS8L3Q8TE67 593 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 PRMT1Q99873 361 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 SLC46A2Q9BY10 475 aa19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 MTCL1Q9Y4B5 1905 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-204ENST00000397760 TRAV19A0A0A6YYK7 116 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 NDC80O14777 642 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 FGF10O15520 208 aaPredicted RBP19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 MOSPD3O75425 235 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 KLKB1P03952 638 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 PFKLP17858 780 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 SLC7A9P82251 487 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 TRIP13Q15645 432 aaPredicted RBP19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 NADSYN1Q6IA69 706 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 FBXL22Q6P050 247 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 CCDC33Q8N5R6 958 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 CCT6BQ92526 530 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 WBP2Q969T9 261 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 AZIN2Q96A70 460 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 ZNF576Q9H609 170 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 PIDD1Q9HB75 910 aa19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 PPARGC1AQ9UBK2 798 aaKnown RBP19.83■□□□□ 0.76
PDLIM2-204ENST00000397760 SGK1O00141 431 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 GSTA1P08263 222 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 TACR2P21452 398 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms