RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 TAZQ16635 292 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DDR2Q16832 855 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 NOMO2Q5JPE7 1267 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 PSTKQ8IV42 348 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 LINC01465Q8N7H1 131 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 NAF1Q96HR8 494 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 TUBB6Q9BUF5 446 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 THAP1Q9NVV9 213 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 NVLO15381 856 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 PROCP04070 461 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 LHX1P48742 406 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DAOAP59103 153 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 MRPS6P82932 125 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 KIAA0319Q5VV43 1072 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 SNX30Q5VWJ9 437 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 NPWQ8N729 165 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 C3orf58Q8NDZ4 430 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 PHACTR1Q9C0D0 580 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 WDR55Q9H6Y2 383 aaPredicted RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DERAQ9Y315 318 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 C9IYK1 514 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SOAT2O75908 522 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 CCNB1P14635 433 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 GM2AP17900 193 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TSPAN8P19075 237 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 NMBRP28336 390 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 AXLP30530 894 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 NAGLUP54802 743 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 GJA9P57773 515 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC18A2Q05940 514 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 EFEMP1Q12805 493 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZBTB17Q13105 803 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SEMA5AQ13591 1074 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC39A12Q504Y0 691 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 UBXN11Q5T124 520 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ASRGL1Q7L266 308 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 LDB1Q86U70 411 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TAC4Q86UU9 113 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SCUBE1Q8IWY4 988 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PLD6Q8N2A8 252 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PYDC1Q8WXC3 89 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 INPP5DQ92835 1189 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 BHMTQ93088 406 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SMARCD1Q96GM5 515 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 B3GALT6Q96L58 329 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 FCRL3Q96P31 734 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 KLHL5Q96PQ7 755 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 NDNQ99608 321 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SPON2Q9BUD6 331 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 AGO3Q9H9G7 860 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 HBS1LQ9Y450 684 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 MAP3K7O43318 606 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ALDOAP04075 364 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PIRTP0C851 137 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ODC1P11926 461 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ELNP15502 786 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TPSB2P20231 275 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 CHRNA4P43681 627 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 CXCR3P49682 368 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TUBP50607 506 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 WASHC5Q12768 1159 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TPSAB1Q15661 275 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 LRRC8BQ6P9F7 803 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZNF534Q76KX8 674 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC41A1Q8IVJ1 513 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 MZB1Q8WU39 189 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PDCD6IPQ8WUM4 868 aaKnown RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 NUF2Q9BZD4 464 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 NT5MQ9NPB1 228 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PEX11AO75192 247 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 AMHP03971 560 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ENO3P13929 434 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ETV4P43268 484 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZBTB6Q15916 424 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 GRAMD1BQ3KR37 738 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 GDF6Q6KF10 455 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 FSTL4Q6MZW2 842 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 PTAR1Q7Z6K3 402 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 DENND6AQ8IWF6 608 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 TOP6BLQ8N6T0 577 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 KCTD4Q8WVF5 259 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 SEPT5Q99719 369 aaPredicted RBP10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 DCDC2Q9UHG0 476 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms