RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 QKIQ96PU8 341 aaKnown RBP eCLIP21.74■■□□□ 1.076e-7■■■□□ 15.2
CPNE1-204ENST00000397443 POMKQ9H5K3 350 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 ASIC3Q9UHC3 531 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 UTP11Q9Y3A2 253 aaKnown RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 WASH4PA8MWX3 477 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 PPP1R12AO14974 1030 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 KRT14P02533 472 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CHKAP35790 457 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 LMNB2Q03252 620 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 USP4Q13107 963 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CARNMT1Q8N4J0 409 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 GPR161Q8N6U8 529 aaKnown RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 MSLNLQ96KJ4 702 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 MYADMQ96S97 322 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CEP41Q9BYV8 373 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 NOL6Q9H6R4 1146 aaKnown RBP21.74■■□□□ 1.07
CPNE1-204ENST00000397443 GDE1Q9NZC3 331 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF212Q9UDV6 495 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 CDH7Q9ULB5 785 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 DOCK8Q8NF50 2099 aa21.74■■□□□ 1.07
CPNE1-204ENST00000397443 TYW5A2RUC4 315 aaKnown RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 FAM187AA6NFU0 413 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 VAV1P15498 845 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 GARSP41250 739 aaKnown RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 PAPOLAP51003 745 aaKnown RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 CDH4P55283 916 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 XRCC4Q13426 336 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 C5orf22Q49AR2 442 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 HEATR6Q6AI08 1181 aaKnown RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 LZTR1Q8N653 840 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 HJURPQ8NCD3 748 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 OR52K2Q8NGK3 314 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 HMCESQ96FZ2 354 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 CDX2Q99626 313 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 PARD6BQ9BYG5 372 aa21.73■■□□□ 1.07
CPNE1-204ENST00000397443 NUP210Q8TEM1 1887 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-204ENST00000397443 A0A1B0GVM2 712 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 TCAF2A6NFQ2 919 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 KCNK1O00180 336 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 RAMP2O60895 175 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 MX2P20592 715 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 GALNT2Q10471 571 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 FAM217AQ8IXS0 508 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 UMODL1-AS1Q8N2C9 162 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 ATPAF2Q8N5M1 289 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 IFT81Q8WYA0 676 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 ERP44Q9BS26 406 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 USP29Q9HBJ7 922 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 SNX24Q9Y343 169 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-204ENST00000397443 BCLAF3A2AJT9 711 aaKnown RBP21.72■■□□□ 1.07
CPNE1-204ENST00000397443 RASA4BC9J798 803 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 H0Y626 953 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 RASA4O43374 803 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 CLDN11O75508 207 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 ZNF177Q13360 481 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-204ENST00000397443 POLD3Q15054 466 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-204ENST00000397443 SMRP1Q8NCR6 262 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 SLCO2A1Q92959 643 aa21.72■■□□□ 1.07
CPNE1-204ENST00000397443 NYNRINQ9P2P1 1898 aaKnown RBP21.71■■□□□ 1.07
CPNE1-204ENST00000397443 A0A0D9SEW6 157 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 HACD1B0YJ81 288 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 KCNA5P22460 613 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 ACVRL1P37023 503 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 MAPKAPK2P49137 400 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 PRKD1Q15139 912 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-204ENST00000397443 TRIM68Q6AZZ1 485 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 TMEM25Q86YD3 366 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 CPXM2Q8N436 756 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 HTR3CQ8WXA8 447 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 ZFYVE19Q96K21 471 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 RAB17Q9H0T7 212 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 KIF9Q9HAQ2 790 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 DONSONQ9NYP3 566 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 CD207Q9UJ71 328 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-204ENST00000397443 RAD54BQ9Y620 910 aa21.71■■□□□ 1.07
CPNE1-204ENST00000397443 HEPACAM2A8MVW5 462 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 F5H423 210 aaPredicted RBP21.7■■□□□ 1.07
CPNE1-204ENST00000397443 NCAM2O15394 837 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 RHOCP08134 193 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 ADCY8P40145 1251 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 MTHFRP42898 656 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 NDST2P52849 883 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 VSNL1P62760 191 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 CDH18Q13634 790 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 PTK6Q13882 451 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 COL19A1Q14993 1142 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 ANO4Q32M45 955 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 TTC39BQ5VTQ0 682 aaPredicted RBP21.7■■□□□ 1.07
CPNE1-204ENST00000397443 AFMIDQ63HM1 303 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 TANGO2Q6ICL3 276 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 LEKR1Q6ZMV7 388 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 GSPT2Q8IYD1 628 aaKnown RBP21.7■■□□□ 1.07
CPNE1-204ENST00000397443 OR7D4Q8NG98 312 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 CCDC110Q8TBZ0 833 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 WFDC5Q8TCV5 224 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 CASKIN2Q8WXE0 1202 aa21.7■■□□□ 1.07
CPNE1-204ENST00000397443 DUS2Q9NX74 493 aaKnown RBP21.7■■□□□ 1.07
CPNE1-204ENST00000397443 NEU2Q9Y3R4 380 aa21.7■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms