RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 LTFP02788 710 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
NDE1-201ENST00000396354 DESP17661 470 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 TKTP29401 623 aaKnown RBP9.51□□□□□ -0.89
NDE1-201ENST00000396354 COPAP53621 1224 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 ADAM17P78536 824 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 TNFAIP2Q03169 654 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 DLG1Q12959 904 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 CDC16Q13042 620 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 DGKDQ16760 1214 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 UBXN11Q5T124 520 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 PDPK2PQ6A1A2 396 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 ZNF280DQ6N043 979 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 RWDD4Q6NW29 188 aaKnown RBP9.51□□□□□ -0.89
NDE1-201ENST00000396354 FRMD7Q6ZUT3 714 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 PIWIL2Q8TC59 973 aaKnown RBP9.51□□□□□ -0.89
NDE1-201ENST00000396354 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 WNT8BQ93098 351 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SIGLEC10Q96LC7 697 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 CATSPER2Q96P56 530 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 CSPG4P5Q96PW8 444 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 RHOBTB2Q9BYZ6 727 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 PRDM12Q9H4Q4 367 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 ITGA11Q9UKX5 1188 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 USP34Q70CQ2 3546 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 E7ESA3 106 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SLC10A3P09131 477 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 RALBP11234 206 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 HDCP19113 662 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 RBP5P82980 135 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 MMEL1Q495T6 779 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SFT2D3Q587I9 215 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 FAM47CQ5HY64 1035 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 MCUQ8NE86 351 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 FNIP1Q8TF40 1166 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 TFB1MQ8WVM0 346 aaKnown RBP9.51□□□□□ -0.89
NDE1-201ENST00000396354 P2RY11Q96G91 374 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 CNBD2Q96M20 576 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 DHRS4Q9BTZ2 278 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SEMA6AQ9H2E6 1030 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 ANGPTL2Q9UKU9 493 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 PCDHGB4Q9UN71 923 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 PCDHGB5Q9Y5G0 923 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 FAM72CH0Y354 149 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CCL22O00626 93 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CHADO15335 359 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 STRNO43815 780 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CSPG5O95196 566 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC4A1P02730 911 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ITGA2BP08514 1039 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ACADSP16219 412 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ATICP31939 592 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC6A3Q01959 620 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 TBL3Q12788 808 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 GK3PQ14409 553 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FAM110CQ1W6H9 321 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC9B1Q4ZJI4 515 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 MORN1Q5T089 497 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FAM72AQ5TYM5 149 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FAM72DQ6L9T8 149 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 HFE2Q6ZVN8 426 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FAM72BQ86X60 149 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 GDPD5Q8WTR4 605 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CDKL2Q92772 493 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 OR52B2Q96RD2 323 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ABHD16BQ9H3Z7 469 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 TASP1Q9H6P5 420 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CHRAC1Q9NRG0 131 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 IARS2Q9NSE4 1012 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 DDX18Q9NVP1 670 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 STX18Q9P2W9 335 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 LNPEPQ9UIQ6 1025 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 PIN4Q9Y237 131 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 MBLAC1A4D2B0 266 aaPredicted RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 A6NHS1 94 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FAM155AB1AL88 458 aaPredicted RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 WFS1O76024 890 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 BEST1O76090 585 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ENDOD1O94919 500 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 LMNAP02545 664 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 LYNP07948 512 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 DARSP14868 501 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 MPSTP25325 297 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CCNFP41002 786 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 MAP3K7CLP57077 242 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CAP1Q01518 475 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 OCRLQ01968 901 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC18A2Q05940 514 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SEPT6Q14141 434 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 CYTH1Q15438 398 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 BOLA3Q53S33 107 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 FBXO48Q5FWF7 155 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 EFHC1Q5JVL4 640 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 C9orf57Q5W0N0 161 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 PACS1Q6VY07 963 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms