RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 KRT14P02533 472 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 PPIDQ08752 370 aaKnown RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 SLC10A2Q12908 348 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 CALCOCO2Q13137 446 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 COL19A1Q14993 1142 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 POLD3Q15054 466 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 RFWD3Q6PCD5 774 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CCNI2Q6ZMN8 369 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 MTERF4Q7Z6M4 381 aaKnown RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 PCGF5Q86SE9 256 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 NPAS3Q8IXF0 933 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 ING5Q8WYH8 240 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 EPB41L5Q9HCM4 733 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CLEC1BQ9P126 229 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CDH7Q9ULB5 785 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 DFFAO00273 331 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CCNCP24863 283 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 ADCY8P40145 1251 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 USP4Q13107 963 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CBX2Q14781 532 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 PRKD1Q15139 912 aaPredicted RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 ZNF77Q15935 545 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 ANO4Q32M45 955 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 ALFQ53S48 1182 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 TFAP2DQ7Z6R9 452 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 BBS7Q8IWZ6 715 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 NPWQ8N729 165 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 FAM71DQ8N9W8 422 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 TDRD5Q8NAT2 981 aaKnown RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 DDI1Q8WTU0 396 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 SEC14L1Q92503 715 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 RTP4Q96DX8 246 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 TSGA13Q96PP4 275 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 MAGEH1Q9H213 219 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 TRPV4Q9HBA0 871 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 THG1LQ9NWX6 298 aaKnown RBP14.04□□□□□ -0.16
VAPB-202ENST00000395802 PAK5Q9P286 719 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 CCL26Q9Y258 94 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 ILVBLA1L0T0 632 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 H0Y626 953 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 SMAPO00193 183 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 CNTN5O94779 1100 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 ITIH2P19823 946 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 RBL1P28749 1068 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 CAV1Q03135 178 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 AFMIDQ63HM1 303 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 CCDC13Q8IYE1 715 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 FATE1Q969F0 183 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 ZSWIM3Q96MP5 696 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 ASB16Q96NS5 453 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 APOL5Q9BWW9 433 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 SMG9Q9H0W8 520 aaKnown RBP14.03□□□□□ -0.16
VAPB-202ENST00000395802 S1PR5Q9H228 398 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 HPCAL4Q9UM19 191 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
VAPB-202ENST00000395802 NOTCH4Q99466 2003 aa14.03□□□□□ -0.16
VAPB-202ENST00000395802 ESYT3A0FGR9 886 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 C5orf60A6NFR6 353 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 TBL1XO60907 577 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 TBX10O75333 385 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 MAP3K6O95382 1288 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 PRAMEF12O95522 483 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 RPS24P62847 133 aaKnown RBP14.02□□□□□ -0.16
VAPB-202ENST00000395802 CDH18Q13634 790 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 ADGRE1Q14246 886 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 DUPD1Q68J44 220 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 GSPT2Q8IYD1 628 aaKnown RBP14.02□□□□□ -0.16
VAPB-202ENST00000395802 CFAP52Q8N1V2 620 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 BPIFB1Q8TDL5 484 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 SNF8Q96H20 258 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 CELF6Q96J87 481 aaKnown RBP14.02□□□□□ -0.16
VAPB-202ENST00000395802 PRICKLE1Q96MT3 831 aaPredicted RBP14.02□□□□□ -0.16
VAPB-202ENST00000395802 PPP1R2P1Q96PQ5 205 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 LGMNQ99538 433 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 KLC2Q9H0B6 622 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 USP29Q9HBJ7 922 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 ZFP14Q9HCL3 533 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 WHRNQ9P202 907 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 TRHDEQ9UKU6 1024 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 MFHAS1Q9Y4C4 1052 aa14.02□□□□□ -0.16
VAPB-202ENST00000395802 HELZP42694 1942 aaKnown RBP14.02□□□□□ -0.17
VAPB-202ENST00000395802 NRG2O14511 850 aaPredicted RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 OPHN1O60890 802 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 GCATO75600 419 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 NEBLO76041 1014 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 LUC7L3O95232 432 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 RHOCP08134 193 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 MICALL1Q8N3F8 863 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 AENQ8WTP8 325 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 CASKIN2Q8WXE0 1202 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 WBP2Q969T9 261 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 P2RY11Q96G91 374 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms