RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CDH18Q13634 790 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 SLC25A45Q8N413 288 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 UBR7Q8N806 425 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 ZNF248Q8NDW4 579 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 RPL10LQ96L21 214 aaKnown RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 TPX2Q9ULW0 747 aaKnown RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 CA5BQ9Y2D0 317 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 PTPN13Q12923 2485 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CAPN8A6NHC0 703 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 RTN2O75298 545 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 IL1BP01584 269 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 LTFP02788 710 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 MPOP05164 745 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 PFKFB1P16118 471 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 NUMBP49757 651 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 ECT2LQ008S8 904 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 RHDQ02161 417 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CUL2Q13617 745 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CBWD6Q4V339 395 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 DCAF6Q58WW2 860 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CBWD3Q5JTY5 395 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CBWD5Q5RIA9 395 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 ARHGAP40Q5TG30 622 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 CDCP2Q5VXM1 449 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 PMF1Q6P1K2 205 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 PRPF39Q86UA1 669 aaKnown RBP16.36■□□□□ 0.21
SNCA-205ENST00000394991 IQCHQ86VS3 1027 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 IRGQQ8WZA9 623 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 TFAP2BQ92481 460 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 WBP1Q96G27 269 aa16.36■□□□□ 0.21
SNCA-205ENST00000394991 ZNF578Q96N58 590 aaPredicted RBP16.36■□□□□ 0.21
SNCA-205ENST00000394991 XPO7Q9UIA9 1087 aaKnown RBP16.36■□□□□ 0.21
SNCA-205ENST00000394991 A0A1B0GVL5 298 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 F13A1P00488 732 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 FYNP06241 537 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 VDRP11473 427 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 RPL13P26373 211 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 TMPRSS3P57727 454 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 E2F1Q01094 437 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 ZNF211Q13398 564 aaPredicted RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 LY6DQ14210 128 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 ELAVL3Q14576 367 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 DQX1Q8TE96 717 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 SLC35F5Q8WV83 523 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 SLC39A13Q96H72 371 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 DDX50Q9BQ39 737 aaKnown RBP16.35■□□□□ 0.21
SNCA-205ENST00000394991 ZSWIM1Q9BR11 485 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 UCKL1Q9NWZ5 548 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
SNCA-205ENST00000394991 PLRG1O43660 514 aaKnown RBP16.34■□□□□ 0.21
SNCA-205ENST00000394991 DXOO77932 396 aaKnown RBP16.34■□□□□ 0.21
SNCA-205ENST00000394991 MOCS3O95396 460 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 MOCS2O96007 188 aaPredicted RBP16.34■□□□□ 0.21
SNCA-205ENST00000394991 MYL1P05976 194 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 GIMD1P0DJR0 217 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
SNCA-205ENST00000394991 DGKAP23743 735 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 GABREP78334 506 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 DAB2P98082 770 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 OVGP1Q12889 678 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 AGBL4Q5VU57 503 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 RNF219Q5W0B1 726 aaPredicted RBP16.34■□□□□ 0.21
SNCA-205ENST00000394991 TRIM69Q86WT6 500 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 OR4C6Q8NH72 309 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 FRS2Q8WU20 508 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 TTC9Q92623 222 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 SARDHQ9UL12 918 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 DMTF1Q9Y222 760 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 COQ4Q9Y3A0 265 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 RP1P56715 2156 aa16.34■□□□□ 0.21
SNCA-205ENST00000394991 A0A1B0GVM2 712 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 SLC7A4O43246 635 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 OPA1O60313 960 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 MAGEC1O60732 1142 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 MYF5P13349 255 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 UCNP55089 124 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
SNCA-205ENST00000394991 POM121L1PQ3SYA9 428 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 BROXQ5VW32 411 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 RAP1GAP2Q684P5 730 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 TMC6Q7Z403 805 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 TAC4Q86UU9 113 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
SNCA-205ENST00000394991 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 FAM181AQ8N9Y4 354 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 SERPINB11Q96P15 392 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 SPAG5Q96R06 1193 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 KDM4CQ9H3R0 1056 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms