RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ULK2Q8IYT8 1036 aa15.92■□□□□ 0.14
PTBP1-204ENST00000394601 SLC2A14Q8TDB8 520 aa15.92■□□□□ 0.14
PTBP1-204ENST00000394601 LGMNQ99538 433 aa15.92■□□□□ 0.14
PTBP1-204ENST00000394601 KPNA7A9QM74 516 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 SPECC1L-ADORA2AF8WAN1 911 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 XPOTO43592 962 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 STRNO43815 780 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.144e-11■■□□□ 12.1
PTBP1-204ENST00000394601 BST1Q10588 318 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 KRT72Q14CN4 511 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 DGKDQ16760 1214 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 EML3Q32P44 896 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 KIAA0319Q5VV43 1072 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 C4orf22Q6V702 233 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 NETO2Q8NC67 525 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 BEST2Q8NFU1 509 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 GTF3C2Q8WUA4 911 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 MRPL1Q9BYD6 325 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 PRR5-ARHGAP8B1AHC4 643 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 COPEO14579 308 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 MFSD11O43934 449 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 TOMM70O94826 608 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 F2P00734 622 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 SMIM10L2AP0DMW4 78 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 SMIM10L2BP0DMW5 78 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 KCNE1P15382 129 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 CRHR1P34998 444 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 ARHGAP8P85298 464 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 PDK3Q15120 406 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 NOTUMQ6P988 496 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 TP53INP2Q8IXH6 220 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 BRI3BPQ8WY22 251 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 TMCO1Q9UM00 188 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 MTO1Q9Y2Z2 717 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 ALDOAP04075 364 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 GNL1P36915 607 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 MATKP42679 507 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 RBM12BQ8IXT5 1001 aaKnown RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 APBB2Q92870 758 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 PPP2R3CQ969Q6 453 aa15.91■□□□□ 0.14
PTBP1-204ENST00000394601 FAM49AQ9H0Q0 323 aaPredicted RBP15.91■□□□□ 0.14
PTBP1-204ENST00000394601 SMIM35A0A1B0GVV1 85 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 KRT37O76014 449 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 FYNP06241 537 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 PCSK6P29122 969 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 EPHX2P34913 555 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 MAGEA8P43361 318 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 AQP5P55064 265 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 WASHC5Q12768 1159 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 C16orf72Q14CZ0 275 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 SLC25A52Q3SY17 297 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 SMG8Q8ND04 991 aaKnown RBP15.9■□□□□ 0.14
PTBP1-204ENST00000394601 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 HTR3CQ8WXA8 447 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 HSFY1Q96LI6 401 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 ZNF778Q96MU6 729 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 TINF2Q9BSI4 451 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 GCOM2Q9BZD3 368 aaPredicted RBP15.9■□□□□ 0.14
PTBP1-204ENST00000394601 RPL26L1Q9UNX3 145 aaKnown RBP15.9■□□□□ 0.14
PTBP1-204ENST00000394601 A0A0A0MRY4 1105 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 VCLP18206 1134 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 NCF2P19878 526 aaPredicted RBP15.9■□□□□ 0.14
PTBP1-204ENST00000394601 PMLP29590 882 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 PDK1Q15118 436 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 DENND5BQ6ZUT9 1274 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 CATSPER4Q7RTX7 472 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 SPATA13Q96N96 652 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 KLK14Q9P0G3 267 aa15.9■□□□□ 0.14
PTBP1-204ENST00000394601 UBQLN1Q9UMX0 589 aaKnown RBP15.9■□□□□ 0.14
PTBP1-204ENST00000394601 CFLARO15519 480 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 ZFXP17010 805 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 TCN1P20061 433 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 MAPK10P53779 464 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 CRADDP78560 199 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 HPCAP84074 193 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 GRAMD4Q6IC98 578 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 ARMCX6Q7L4S7 300 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.89■□□□□ 0.131e-7■■■□□ 18.4
PTBP1-204ENST00000394601 HSFX1Q9UBD0 423 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 GINS2Q9Y248 185 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 WDR27A2RRH5 827 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 F5H423 210 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 CA8P35219 290 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 NDUFV1P49821 464 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 CCNA1P78396 465 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 DPYSQ14117 519 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 MROH9Q5TGP6 573 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 FAM131BQ86XD5 332 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 DEFB106AQ8N104 65 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 NPY6RQ99463 290 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 PSAT1Q9Y617 370 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 FNDC1Q4ZHG4 1894 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 TRPM7Q96QT4 1865 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 RRN3P2A6NIE6 340 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 HNRNPCL1O60812 293 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms