RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 L1CAMP32004 1257 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 PSMC2P35998 433 aaKnown RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 NRLP54845 237 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 IL1RL1Q01638 556 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 KLF10Q13118 480 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 INSCQ1MX18 579 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 TPH2Q8IWU9 490 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 TNIP2Q8NFZ5 429 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 JPH3Q8WXH2 748 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SGCDQ92629 289 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 OR2B2Q9GZK3 357 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 C20orf96Q9NUD7 363 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 ATPIF1Q9UII2 106 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 A0A0G2JMP0 313 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 H0Y858 1186 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 RAD51BO15315 384 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 MTSS1O43312 755 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 CBLP22681 906 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 ECE1P42892 770 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 OR3A3P47888 321 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 B2MP61769 119 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SPARTQ8N0X7 666 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SLC10A4Q96EP9 437 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SERPINI1Q99574 410 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 AKIP1Q9NQ31 210 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 ACSS2Q9NR19 701 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 TOR4AQ9NXH8 423 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 ENPP5Q9UJA9 477 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
SLC28A1-203ENST00000394573 MAGEB6P1A0A0J9YX57 407 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 E2F8A0AVK6 867 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TRIM77I1YAP6 450 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 AGRPO00253 132 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 NEMP1O14524 444 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 AXIN1O15169 862 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TPST1O60507 370 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 SNNO75324 88 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 EPN2O95208 641 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 BCAMP50895 628 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TAS2R40P59535 323 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 MYL7Q01449 175 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 GNA13Q14344 377 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 POU6F1Q14863 301 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 POC5Q8NA72 575 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TFAP2CQ92754 450 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 METTL2AQ96IZ6 378 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ACAT2Q9BWD1 397 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 MKRN2Q9H000 416 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CCSER2Q9H7U1 834 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 SORCS3Q9UPU3 1222 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TESMINQ9Y4I5 508 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ATRNL1Q5VV63 1379 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 GPC4O75487 556 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 DAB1O75553 588 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 ACAT1P24752 427 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 GMPRP36959 345 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 GPD2P43304 727 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TNNI2P48788 182 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CCNA1P78396 465 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 TMEM236Q5W0B7 351 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 USP17L6PQ6QN14 398 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CHSY3Q70JA7 882 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
SLC28A1-203ENST00000394573 FBXL6Q8N531 539 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms