RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 GULP1Q9UBP9 304 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-203ENST00000393310 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 PTPRJQ12913 1337 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 MYH2Q9UKX2 1941 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 SLC12A8A0AV02 714 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 TTC34A8MYJ7 566 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 CACNB4O00305 520 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-203ENST00000393310 FPGTO14772 594 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 SCAMP1O15126 338 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 SEMA3DO95025 777 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 LYPLA2O95372 231 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 ARF4P18085 180 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-203ENST00000393310 CLCN4P51793 760 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 AMHR2Q16671 573 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 KIAA1755Q5JYT7 1200 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 CRTC1Q6UUV9 634 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 ANO5Q75V66 913 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 FAM124AQ86V42 546 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 NUDCD3Q8IVD9 361 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 FAM160A2Q8N612 972 aaPredicted RBP8.31□□□□□ -1.08
LIMS1-203ENST00000393310 TMEM105Q8N8V8 129 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 XXYLT1Q8NBI6 393 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 PSKH2Q96QS6 385 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 ZWILCHQ9H900 591 aa8.31□□□□□ -1.08
LIMS1-203ENST00000393310 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 RHPN2P1A8MT19 583 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 RAD51BO15315 384 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SEC31AO94979 1220 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 PPARGP37231 505 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 CYP2J2P51589 502 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 EIF3IQ13347 325 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 FAM26FQ5R3K3 315 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GKN2Q86XP6 184 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 MB21D2Q8IYB1 491 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 TOP6BLQ8N6T0 577 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GOLM1Q8NBJ4 401 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 NT5C1BQ96P26 610 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 FAM167BQ9BTA0 163 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 NT5C1AQ9BXI3 368 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 AVENQ9NQS1 362 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 TBC1D23Q9NUY8 699 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GRIN2DO15399 1336 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 ASMTLO95671 621 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 PRNPP04156 253 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 BRCC3P46736 316 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 DSTNP60981 165 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GLE1Q53GS7 698 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 RGS9BPQ6ZS82 235 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 CMTM8Q8IZV2 173 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SLC7A5P1Q8MH63 180 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 OR8H2Q8N162 312 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 ZNF689Q96CS4 500 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 STAMBPL1Q96FJ0 436 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 HSPA12BQ96MM6 686 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 QPCTLQ9NXS2 382 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GLDCP23378 1020 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 TRIM71Q2Q1W2 868 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SYT13Q7L8C5 426 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 ZNF589Q86UQ0 364 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 HEATR4Q86WZ0 1026 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SYT2Q8N9I0 419 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 GDAP1Q8TB36 358 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 FGF11Q92914 225 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 RMDN1Q96DB5 314 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 TTC7AQ9ULT0 858 aaPredicted RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 DMTF1Q9Y222 760 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 SNX8Q9Y5X2 465 aa8.3□□□□□ -1.08
LIMS1-203ENST00000393310 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 DDX60LQ5H9U9 1706 aaKnown RBP8.3□□□□□ -1.08
LIMS1-203ENST00000393310 PEX12O00623 359 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 ABLIM1O14639 778 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 ADH1BP00325 375 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 TRIM25Q14258 630 aaKnown RBP8.29□□□□□ -1.08
LIMS1-203ENST00000393310 FAXCQ5TGI0 409 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 P3H4Q92791 437 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 SNX21Q969T3 373 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 MTMR8Q96EF0 704 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 TCEANC2Q96MN5 208 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 GPR174Q9BXC1 333 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 VPS16Q9H269 839 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 EBF3Q9H4W6 596 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 GAREM1Q9H706 876 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 CHMP1AQ9HD42 196 aaPredicted RBP8.29□□□□□ -1.08
LIMS1-203ENST00000393310 TM7SF3Q9NS93 570 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.29□□□□□ -1.08
LIMS1-203ENST00000393310 ARHGAP33O14559 1287 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 FSCN2O14926 492 aa8.29□□□□□ -1.08
LIMS1-203ENST00000393310 HSF2BPO75031 334 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms