RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 BBS2Q9BXC9 721 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 MAGEB5Q9BZ81 275 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 CNTN5O94779 1100 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 PAPSS2O95340 614 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 KRT1P04264 644 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 ERCC2P18074 760 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 SERPINB6P35237 376 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 CLCN6P51797 869 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 RFTN1Q14699 578 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 FBXO43Q4G163 708 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 TRIM68Q6AZZ1 485 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 MFSD7Q6UXD7 560 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 C12orf40Q86WS4 652 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 MAIP1Q8WWC4 291 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 MAML1Q92585 1016 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 ACDQ96AP0 544 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 RPRD1AQ96P16 312 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 HACD1B0YJ81 288 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 FTCDO95954 541 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 MOCS2O96007 188 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 CD48P09326 243 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 PYGMP11217 842 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 TCP1P17987 556 aaKnown RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 RPS24P62847 133 aaKnown RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 SIGLEC14Q08ET2 396 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 SERINC3Q13530 473 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 CCINQ13939 588 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 SIX1Q15475 284 aaPredicted RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 CYP1B1Q16678 543 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 DGKKQ5KSL6 1271 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 ALG1LQ6GMV1 187 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 BZW1Q7L1Q6 419 aaKnown RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 TEX26Q8N6G2 289 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 HSPH1Q92598 858 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 ISG20Q96AZ6 181 aaKnown RBP13.62□□□□□ -0.23
USP44-202ENST00000393091 HDAC11Q96DB2 347 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 SNX10Q9Y5X0 201 aa13.62□□□□□ -0.23
USP44-202ENST00000393091 SYNJ2BP-COX16A0A087WUM0 186 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 TMEM110-MUSTN1A8MSY1 372 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 APOC4-APOC2K7ER74 178 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 TULP3O75386 442 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 APOC2P02655 101 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ZNF177Q13360 481 aaPredicted RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 KRT81Q14533 505 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ZNF569Q5MCW4 686 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 CEP44Q9C0F1 390 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 COX16Q9P0S2 106 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 STIM2Q9P246 746 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 HS3ST2Q9Y278 367 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ASGR2P07307 311 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 HLA-FP30511 346 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 CSNK1DP48730 415 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 LMAN2Q12907 356 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 TTC13Q8NBP0 860 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 K7EQS6 105 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 PEX11BO96011 259 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 EPHB2P29323 1055 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 DGKGP49619 791 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 NAP1L1P55209 391 aaKnown RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 MRPS21P82921 87 aaKnown RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 GNA12Q03113 381 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 PRKD1Q15139 912 aaPredicted RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 INO80DQ53TQ3 878 aaPredicted RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 FSTL4Q6MZW2 842 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 TERB1Q8NA31 727 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 WFDC5Q8TCV5 224 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 DDI1Q8WTU0 396 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 RTP4Q96DX8 246 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 ZFYVE19Q96K21 471 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 P2RY13Q9BPV8 354 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 CD248Q9HCU0 757 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
USP44-202ENST00000393091 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
USP44-202ENST00000393091 FAM170AA1A519 330 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 NEDD8-MDP1E9PL57 170 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 TJP3O95049 919 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 CCNCP24863 283 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 CETN2P41208 172 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 GEMIN4P57678 1058 aaKnown RBP13.6□□□□□ -0.23
USP44-202ENST00000393091 IL10RBQ08334 325 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 RALGPS1Q5JS13 557 aa13.6□□□□□ -0.23
USP44-202ENST00000393091 TMCO3Q6UWJ1 677 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms