RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 MX2P20592 715 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 ARL4AP40617 200 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 IFRD2Q12894 506 aaPredicted RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 TBCCQ15814 346 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 ARHGAP22Q7Z5H3 698 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 FAM131BQ86XD5 332 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 MYLK4Q86YV6 388 aaPredicted RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 ADGRF2Q8IZF7 708 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 RAB3IL1Q8TBN0 382 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CCDC106Q9BWC9 280 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 SPATA16Q9BXB7 569 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PLEKHA5Q9HAU0 1116 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 SIRPGQ9P1W8 387 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 A0A088AWK7 358 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 C2CD4BA6NLJ0 364 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 KLF11O14901 512 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 VCLP18206 1134 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CRHR1P34998 444 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 TAF6P49848 677 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CDK7P50613 346 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 PKNOX1P55347 436 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 PDK3Q15120 406 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CYTH1Q15438 398 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CCDC14Q49A88 953 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CMPK2Q5EBM0 449 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PID1Q7Z2X4 250 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PHTF2Q8N3S3 785 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CEP70Q8NHQ1 597 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 MPP4Q96JB8 637 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 GAD1Q99259 594 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 APOL2Q9BQE5 337 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 ZFYVE28Q9HCC9 887 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CDH22Q9UJ99 828 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 ADAMTS6Q9UKP5 1117 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 PFDN1O60925 122 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 GLRA3O75311 464 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 GARSP41250 739 aaKnown RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 C11orf91Q3C1V1 193 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 HSF5Q4G112 596 aaPredicted RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 RGMBQ6NW40 437 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 NT5DC4Q86YG4 428 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 COLGALT1Q8NBJ5 622 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 ADAM32Q8TC27 787 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 ARHGAP26Q9UNA1 814 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 INPP5FQ9Y2H2 1132 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 CDY2AQ9Y6F7 541 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 CD4P01730 458 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 SERPINE1P05121 402 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 CPA3P15088 417 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 GLRBP48167 497 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 CDC42EP1Q00587 391 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 SLC6A3Q01959 620 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 TRIM32Q13049 653 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 PDK2Q15119 407 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 FSCBQ5H9T9 825 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 IL31Q6EBC2 164 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 TMA16Q96EY4 203 aaKnown RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 MARK4Q96L34 752 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 EPAS1Q99814 870 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 FRMD8Q9BZ67 464 aaPredicted RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 DMAP1Q9NPF5 467 aaPredicted RBP11.09□□□□□ -0.63
BRF1-204ENST00000392557 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 PSAT1Q9Y617 370 aa11.09□□□□□ -0.63
BRF1-204ENST00000392557 SDR42E2A6NKP2 422 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 AKR1A1P14550 325 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 FOLH1Q04609 750 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 ART3Q13508 389 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 PDE1CQ14123 709 aaPredicted RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 WSCD1Q658N2 575 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 FRMD7Q6ZUT3 714 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 ZNF669Q96BR6 464 aaPredicted RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 APBA2Q99767 749 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 WDR55Q9H6Y2 383 aaPredicted RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 CAB39LQ9H9S4 337 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 TMEM216Q9P0N5 145 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.63
BRF1-204ENST00000392557 POMPQ9Y244 141 aa11.08□□□□□ -0.63
BRF1-204ENST00000392557 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
BRF1-204ENST00000392557 KCNK1O00180 336 aa11.08□□□□□ -0.64
BRF1-204ENST00000392557 UQCRBP14927 111 aa11.08□□□□□ -0.64
BRF1-204ENST00000392557 PMLP29590 882 aa11.08□□□□□ -0.64
BRF1-204ENST00000392557 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms