RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 PPP4R1Q8TF05 950 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 HDAC11Q96DB2 347 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 PGLYRP2Q96PD5 576 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 GBA3Q9H227 469 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 C1orf21Q9H246 121 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 NMRK1Q9NWW6 199 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 RRN3Q9NYV6 651 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 CACNG4Q9UBN1 327 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 ZCWPW2A0A1B0GU75 182 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 MYBPHLA2RUH7 354 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
RFC5-201ENST00000392542 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
RFC5-201ENST00000392542 MTSS1O43312 755 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 KLHL2O95198 593 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 RALBP11234 206 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 GNAT1P11488 350 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 CDC25CP30307 473 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 HOXC8P31273 242 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 CD68P34810 354 aaPredicted RBP12.59□□□□□ -0.39
RFC5-201ENST00000392542 LIMK2P53671 638 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 SNX30Q5VWJ9 437 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 STRA8Q7Z7C7 330 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 CMC1Q7Z7K0 106 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 FAM167BQ9BTA0 163 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 AP5M1Q9H0R1 490 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 TRHDEQ9UKU6 1024 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 APOBEC2Q9Y235 224 aaKnown RBP12.59□□□□□ -0.39
RFC5-201ENST00000392542 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
RFC5-201ENST00000392542 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.59□□□□□ -0.39
RFC5-201ENST00000392542 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 MEIS3P2A8K0S8 358 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 TBX10O75333 385 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 CIB2O75838 187 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ALOX15P16050 662 aaPredicted RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 HARS2P49590 506 aaKnown RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 CDK7P50613 346 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 CACNA2D1P54289 1103 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 GALNT2Q10471 571 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ATG14Q6ZNE5 492 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 MAVSQ7Z434 540 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 NRG4Q8WWG1 115 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 MLPHQ9BV36 600 aaPredicted RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 PNPOQ9NVS9 261 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ZNF358Q9NW07 568 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 SMNDC1O75940 238 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFC5-201ENST00000392542 F9P00740 461 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 CPA3P15088 417 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 NFKB1P19838 968 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 SERPINB6P35237 376 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 GMPRP36959 345 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 NPY2RP49146 381 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 MXRA7P84157 204 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 BHLHA9Q7RTU4 235 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 CTU1Q7Z7A3 348 aaKnown RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 OR6Y1Q8NGX8 325 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 DTX3LQ8TDB6 740 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 EPAS1Q99814 870 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 COLEC11Q9BWP8 271 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 ZNF212Q9UDV6 495 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 CDH9Q9ULB4 789 aa12.58□□□□□ -0.4
RFC5-201ENST00000392542 TIMM13Q9Y5L4 95 aaPredicted RBP12.58□□□□□ -0.4
RFC5-201ENST00000392542 E2F8A0AVK6 867 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 MPOP05164 745 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 C6orf222P0C671 652 aaPredicted RBP12.57□□□□□ -0.4
RFC5-201ENST00000392542 MYL4P12829 197 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 ARRB2P32121 409 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 CXCR3P49682 368 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 IDH3AP50213 366 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 CLCNKBP51801 687 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 FKBP1BP68106 108 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 ITGA9Q13797 1035 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 CERCAMQ5T4B2 595 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 ANO7Q6IWH7 933 aa12.57□□□□□ -0.4
RFC5-201ENST00000392542 FSTL4Q6MZW2 842 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms