RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 HACD1B0YJ81 288 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 RRM2P31350 389 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-203ENST00000391813 DPYSQ14117 519 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 SGO1Q5FBB7 561 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 TIGD7Q6NT04 549 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-203ENST00000391813 CDH24Q86UP0 819 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 KCNMB4Q86W47 210 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 LRRC71Q8N4P6 559 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 SPIRE2Q8WWL2 714 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 HMX1Q9NP08 348 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-203ENST00000391813 TMCC3Q9ULS5 477 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 A0A0B4J269 797 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 WDR27A2RRH5 827 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 CD3EAPO15446 510 aaKnown RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 SEC24AO95486 1093 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 HSMCR30P0CW71 290 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 THPOP40225 353 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 MARCKSL1P49006 195 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 PRIM2P49643 509 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 SPATA2LQ8IUW3 424 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 TCF12Q99081 682 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 DGCR6LQ9BY27 220 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 SPAG4Q9NPE6 437 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 ADAM28Q9UKQ2 775 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 ASTN2O75129 1339 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 CBX3Q13185 183 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 KRT33BQ14525 404 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 HGSNATQ68CP4 663 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 CCDC149Q6ZUS6 474 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 COX4I2Q96KJ9 171 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 MTG1Q9BT17 334 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 PRKD2Q9BZL6 878 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 IDH3BO43837 385 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 NCAM1P13591 858 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 TTLL9Q3SXZ7 439 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 AARS2Q5JTZ9 985 aaKnown RBP20.05■□□□□ 0.8
SHANK1-203ENST00000391813 SLITRK1Q96PX8 696 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 PRDM16Q9HAZ2 1276 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 DDIT4Q9NX09 232 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 PCDHB7Q9Y5E2 793 aa20.05■□□□□ 0.8
SHANK1-203ENST00000391813 GLRA2P23416 452 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 SCARA3Q6AZY7 606 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 LGALS13Q9UHV8 139 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 IFNA14P01570 189 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 ARP10275 920 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 PERM1Q5SV97 790 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 PCDH20Q8N6Y1 951 aaKnown RBP20.04■□□□□ 0.8
SHANK1-203ENST00000391813 ITFG1Q8TB96 612 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM176AQ96HP8 235 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 HS6ST1O60243 411 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TSC22D2O75157 780 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 ZNF682O95780 498 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 HOXB8P17481 243 aaPredicted RBP20.04■□□□□ 0.8
SHANK1-203ENST00000391813 ITGA1P56199 1179 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TNK2Q07912 1038 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 IQSEC1Q6DN90 963 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 C16orf46Q6P387 395 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TRIM74Q86UV6 250 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TRIM73Q86UV7 250 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 SLC9A9Q8IVB4 645 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 MBOAT7Q96N66 472 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 ROGDIQ9GZN7 287 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 WWOXQ9NZC7 414 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 TRIM17Q9Y577 477 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 SLIT2O94813 1529 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 MGAT1P26572 445 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 NFIL3Q16649 462 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 RIOX2Q8IUF8 465 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 CHID1Q9BWS9 393 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 NUAK2Q9H093 628 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 DHX33Q9H6R0 707 aaKnown RBP20.04■□□□□ 0.8
SHANK1-203ENST00000391813 CLUHO75153 1309 aa20.04■□□□□ 0.8
SHANK1-203ENST00000391813 CENPXA8MT69 81 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 KDELR1P24390 212 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 ADORA2AP29274 412 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 GJA8P48165 433 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MAPK10P53779 464 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 BCAT1P54687 386 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 GPR107Q5VW38 600 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SYTL1Q8IYJ3 562 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 COLEC11Q9BWP8 271 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 WDCPQ9H6R7 721 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SSU72Q9NP77 194 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 KRT84Q9NSB2 600 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SELENONQ9NZV5 590 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 UBA2Q9UBT2 640 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 TMA7Q9Y2S6 64 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 XRN1Q8IZH2 1706 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM191CA6NGB0 347 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 PRR5-ARHGAP8B1AHC4 643 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 UPP2O95045 317 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 RARRES1P49788 294 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MYL6P60660 151 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 ARHGAP8P85298 464 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 PLIN5Q00G26 463 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 BNIP2Q12982 314 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 POLD3Q15054 466 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms