RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CCR9P51686 369 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 ADPRHP54922 357 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 CDH15P55291 814 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 MZT2BQ6NZ67 158 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 MTFR2Q6P444 385 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 FAM47BQ8NA70 645 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 NFKBIDQ8NI38 313 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 PIGKQ92643 395 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 SARAFQ96BY9 339 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 ADAD1Q96M93 576 aaKnown RBP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 TIGD1Q96MW7 591 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 PHF7Q9BWX1 381 aaPredicted RBP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 TLR8Q9NR97 1041 aaKnown RBP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 SLC22A11Q9NSA0 550 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 KRT84Q9NSB2 600 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 ARL15Q9NXU5 204 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 IPO11Q9UI26 975 aaKnown RBP5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 PKP3Q9Y446 797 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 SCINQ9Y6U3 715 aa5.9□□□□□ -1.46
RNU6-40P-201ENST00000384254 A0A087X1B8 175 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 GAGE10A6NGK3 116 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 SGPL1O95470 568 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HLA-DQA2P01906 255 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HSP90AA1P07900 732 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 ARSAP15289 507 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 BDNFP23560 247 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 AVPR2P30518 371 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HNF1BP35680 557 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 STAT1P42224 750 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 CLNS1AP54105 237 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 MTA1Q13330 715 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 KRT32Q14532 448 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 ZXDCQ2QGD7 858 aaPredicted RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 AWAT1Q58HT5 328 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 SLC30A9Q6PML9 568 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 ATF7IPQ6VMQ6 1270 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 RRM2BQ7LG56 351 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 MRGPRGQ86SM5 289 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 KLBQ86Z14 1044 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 PNLDC1Q8NA58 520 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 RUFY2Q8WXA3 655 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 CNOT9Q92600 299 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 ATP2A3Q93084 1043 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 REPS1Q96D71 796 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 EYA3Q99504 573 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 CADM1Q9BY67 442 aaKnown RBP5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 IL21RQ9HBE5 538 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 HCN3Q9P1Z3 774 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 DHDHQ9UQ10 334 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 CAMK2AQ9UQM7 478 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 TNFSF13BQ9Y275 285 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 CNPY2Q9Y2B0 182 aa5.89□□□□□ -1.47
RNU6-40P-201ENST00000384254 EIF5BO60841 1220 aaKnown RBP5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 F9P00740 461 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 SKIV2L2P42285 1042 aaKnown RBP5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 CCT4P50991 539 aaKnown RBP5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 IL13RA2Q14627 380 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 AP5B1Q2VPB7 878 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 ARL13AQ5H913 290 aaPredicted RBP5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 HAUS3Q68CZ6 603 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 AADACL2Q6P093 401 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 CPLX4Q7Z7G2 160 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 ARHGEF25Q86VW2 580 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 RFX6Q8HWS3 928 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 RHPN2Q8IUC4 686 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 GHDCQ8N2G8 530 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 ADAMTS15Q8TE58 950 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 CENPIQ92674 756 aaPredicted RBP5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 C5orf34Q96MH7 638 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 IFT27Q9BW83 186 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 TBC1D22BQ9NU19 505 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 BLOC1S4Q9NUP1 217 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 TAS2R10Q9NYW0 307 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 DTX4Q9Y2E6 619 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 INSL6Q9Y581 213 aa5.88□□□□□ -1.47
RNU6-40P-201ENST00000384254 POLR2AP24928 1970 aaKnown RBP5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 ANKRD18BA2A2Z9 1011 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 FAM90A7PA6NKC0 464 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 FAM90A22PA8MWA6 464 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 FAM90A12PA8MX19 464 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 FAM90A23PA8MXZ1 464 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 ZBED4O75132 1171 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 TNFRSF1AP19438 455 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 GJC1P36383 396 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 ZNF766Q5HY98 468 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 SH2D4BQ5SQS7 431 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 ITPRIPL1Q6GPH6 555 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 RNF144BQ7Z419 303 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 MDGA2Q7Z553 956 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 AMER2Q8N7J2 671 aa5.87□□□□□ -1.47
RNU6-40P-201ENST00000384254 C2CD4CQ8TF44 421 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms